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L1_008_000M1_scaffold_325

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_325_1
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

278..1198
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RDG2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40966.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
plasmid segregation actin-type ATPase ParM
L1_008_000M1_scaffold_325_2
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1195..1470
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUK4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO60654.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
plasmid segregation centromere-binding protein ParR
L1_008_000M1_scaffold_325_3
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1499..2047
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VQD9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO62350.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L1_008_000M1_scaffold_325_4
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2197..2790
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QYT2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40965.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L1_008_000M1_scaffold_325_5
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3376..3975
DNA (600bp) protein (200aa)
Cytosine-specific methyltransferase n=1 Tax=Clostridium sp. CAG:352 RepID=R6R6J3_9CLOT
Cytosine-specific methyltransferase {ECO:0000313|EMBL:CDC40964.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Putative DNA (cytosine-5-)-methyltransferase
L1_008_000M1_scaffold_325_6
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4010..4924
DNA (915bp) protein (305aa)
Uncharacterized protein n=2 Tax=root RepID=R6QWG3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40963.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Putative amidoligase enzyme.
L1_008_000M1_scaffold_325_7
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4999..5475
DNA (477bp) protein (159aa)
AIG2-like family protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6S2W4_9CLOT
AIG2-like family protein {ECO:0000313|EMBL:CDC40962.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
AIG2-like family.
L1_008_000M1_scaffold_325_8
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5560..9777
DNA (4218bp) protein (1406aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUK9_9CLOT
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EDO60659.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Collagen adhesion protein
L1_008_000M1_scaffold_325_9
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9774..10517
DNA (744bp) protein (248aa)
Putative sortase SrtB family n=1 Tax=Clostridium sp. CAG:352 RepID=R6R6I7_9CLOT
Putative sortase SrtB family {ECO:0000313|EMBL:CDC40959.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L1_008_000M1_scaffold_325_10
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10692..10937
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUL1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO60661.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L1_008_000M1_scaffold_325_11
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10942..12105
DNA (1164bp) protein (388aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUL3_9CLOT
L1_008_000M1_scaffold_325_12
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12124..13092
DNA (969bp) protein (323aa)
Toprim domain protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QWP2_9CLOT
Toprim domain protein {ECO:0000313|EMBL:CDC41003.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L1_008_000M1_scaffold_325_13
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13162..13815
DNA (654bp) protein (218aa)
Uncharacterized protein n=2 Tax=root RepID=R6S321_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC41002.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L1_008_000M1_scaffold_325_14
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13833..14729
DNA (897bp) protein (299aa)
Bacterial transferase hexapeptide repeat protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RDN2_9CLOT
Bacterial transferase hexapeptide repeat protein {ECO:0000313|EMBL:CDC41001.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
phage related protein
L1_008_000M1_scaffold_325_15
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14745..15587
DNA (843bp) protein (281aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
DNA modification methylase (EC:2.1.1.72)
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUL7_9CLOT
L1_008_000M1_scaffold_325_16

Not on your lists

15584..16018
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1RYD2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC50343.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_008_000M1_scaffold_325_17

Not on your lists

16152..16961
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1TZF2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC71505.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_008_000M1_scaffold_325_18
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16975..17283
DNA (309bp) protein (103aa)
Uncharacterized protein n=2 Tax=root RepID=R6S319_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40997.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Bacterial mobilisation protein (MobC)./Ribbon-helix-helix protein, copG family.
L1_008_000M1_scaffold_325_19
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17569..18708
DNA (1140bp) protein (380aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RDL9_9CLOT
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:CDC40996.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Relaxase/Mobilisation nuclease domain.
L1_008_000M1_scaffold_325_20

Not on your lists

18713..18982
DNA (270bp) protein (90aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1RUJ2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC52257.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_008_000M1_scaffold_325_21
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19059..19814
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUM3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO60673.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L1_008_000M1_scaffold_325_22
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19905..20768
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R6N3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC40994.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L1_008_000M1_scaffold_325_23

Not on your lists

20866..21168
DNA (303bp) protein (101aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1VBR4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC81401.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_008_000M1_scaffold_325_24
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21361..23025
DNA (1665bp) protein (555aa)
TraG/TraD family protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6S2Z5_9CLOT
TraG/TraD family protein {ECO:0000313|EMBL:CDC40992.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Type IV secretory pathway, VirD4 components
L1_008_000M1_scaffold_325_25
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23048..23428
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUM8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO60678.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L1_008_000M1_scaffold_325_26
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23629..24336
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RTZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37922.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L1_008_000M1_scaffold_325_27
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24786..27134
DNA (2349bp) protein (783aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO60684.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Domain of unknown function DUF87.
L1_008_000M1_scaffold_325_28
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27722..29473
DNA (1752bp) protein (584aa)
Peptidase M23 family n=2 Tax=root RepID=R6QMS6_9CLOT
Peptidase M23 family {ECO:0000313|EMBL:CDC37918.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L1_008_000M1_scaffold_325_29
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29569..29970)
DNA (402bp) protein (134aa)
Transcriptional regulatory protein, C-terminal domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUN6_9CLOT
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EDO60686.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
two component transcriptional regulator, winged helix family
L1_008_000M1_scaffold_325_30
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(29976..30338)
DNA (363bp) protein (121aa)
iron-dependent transcriptional regulator n=1 Tax=[Streptococcus] pleomorphus RepID=UPI0003B2FF40
Uncharacterized protein {ECO:0000313|EMBL:CDB03090.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Mn-dependent transcriptional regulator
Displaying items 1-30 of 57 in total

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