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L1_008_000M1_scaffold_326

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Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_326_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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430..2145
DNA (1716bp) protein (572aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBN0_9FIRM
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EEV00837.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ABC-type oligopeptide transport system, periplasmic component
L1_008_000M1_scaffold_326_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2305..3240
DNA (936bp) protein (312aa)
ABC transporter, permease protein n=2 Tax=Roseburia RepID=C7GBM8_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEV00835.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_008_000M1_scaffold_326_3
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3242..4312
DNA (1071bp) protein (357aa)
ABC transporter, permease protein n=2 Tax=Roseburia RepID=C7GBM7_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EEV00834.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L1_008_000M1_scaffold_326_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4329..5420
DNA (1092bp) protein (364aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain n=4 Tax=Roseburia RepID=D4KM20_9FIRM
oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEV00833.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_000M1_scaffold_326_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5407..6342
DNA (936bp) protein (312aa)
ATPase components of various ABC-type transport systems, contain duplicated ATPase n=4 Tax=Roseburia RepID=D4KM21_9FIRM
ATPase components of various ABC-type transport systems, contain duplicated ATPase
ATPase components of various ABC-type transport systems, contain duplicated ATPase {ECO:0000313|EMBL:CBL07923.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_326_6
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6554..8275
DNA (1722bp) protein (574aa)
Methyl-accepting chemotaxis protein n=3 Tax=Roseburia RepID=D4KM23_9FIRM
Methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDA55939.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_326_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8384..9766
DNA (1383bp) protein (461aa)
Amino acid carrier protein n=2 Tax=Roseburia intestinalis RepID=D4KYN4_9FIRM
amino acid carrier protein
Amino acid carrier protein {ECO:0000313|EMBL:CBL07926.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_326_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9791..11146
DNA (1356bp) protein (452aa)
Transporter n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BRP6_9FIRM
Na+-dependent transporters of the SNF family
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_326_9
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11248..11865
DNA (618bp) protein (206aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=R6BA46_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA55936.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_326_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12101..13312
DNA (1212bp) protein (404aa)
HD-GYP domain n=2 Tax=Roseburia intestinalis RepID=D4KYN8_9FIRM
HD-GYP domain
HD-GYP domain {ECO:0000313|EMBL:CBL12478.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_326_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13460..15241)
DNA (1782bp) protein (594aa)
Cache domain protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBL7_9FIRM
Cache domain protein {ECO:0000313|EMBL:EEV00824.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Methyl-accepting chemotaxis protein
L1_008_000M1_scaffold_326_12
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16048..17703
DNA (1656bp) protein (552aa)
Cobalamin biosynthesis protein CbiK Co2+ chelatase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AY06_9FIRM
Cobalamin biosynthesis protein CbiK Co2+ chelatase {ECO:0000313|EMBL:CDA55930.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Cobalamin biosynthesis protein CbiK, Co2+ chelatase
L1_008_000M1_scaffold_326_13
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17719..19350
DNA (1632bp) protein (544aa)
ABC-type Fe3+-hydroxamate transport system periplasmic component n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B4G2_9FIRM
ABC-type Fe3+-hydroxamate transport system periplasmic component {ECO:0000313|EMBL:CDA55929.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
ABC-type Fe3+-hydroxamate transport system, periplasmic component
L1_008_000M1_scaffold_326_14
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19379..20383
DNA (1005bp) protein (335aa)
Iron compound ABC transporter permease protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AVK0_9FIRM
Iron compound ABC transporter permease protein {ECO:0000313|EMBL:CDA55928.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
ABC-type Fe3+-siderophore transport system, permease component
L1_008_000M1_scaffold_326_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20390..21571
DNA (1182bp) protein (394aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components {ECO:0000313|EMBL:CBL07934.1}; EC=3.6.3.34 {ECO:0000313|EMBL:CBL07934.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KM32_9FIRM
L1_008_000M1_scaffold_326_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21568..24606
DNA (3039bp) protein (1013aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=C7GBL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00819.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Protein of unknown function (DUF2726).
L1_008_000M1_scaffold_326_17
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24688..25392
DNA (705bp) protein (235aa)
Transcriptional regulator, GntR family n=4 Tax=Roseburia RepID=D4KM34_9FIRM
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CBL12485.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_326_18
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25618..26973
DNA (1356bp) protein (452aa)
Gluconate transporter n=2 Tax=Roseburia RepID=D4KM35_9FIRM
gluconate transporter
Gluconate permease {ECO:0000313|EMBL:CDA55917.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_326_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27154..28941
DNA (1788bp) protein (596aa)
Dihydroxyacid dehydratase/phosphogluconate dehydratase {ECO:0000313|EMBL:CBL07938.1}; EC=4.2.1.9 {ECO:0000313|EMBL:CBL07938.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Dihydroxyacid dehydratase/phosphogluconate dehydratase (EC:4.2.1.9)
Dihydroxyacid dehydratase/phosphogluconate dehydratase n=2 Tax=Roseburia intestinalis RepID=D4KM36_9FIRM
L1_008_000M1_scaffold_326_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29255..30403
DNA (1149bp) protein (383aa)
Predicted N-acetylglucosamine kinase n=2 Tax=Roseburia intestinalis RepID=D4KYP8_9FIRM
Predicted N-acetylglucosamine kinase
Predicted N-acetylglucosamine kinase {ECO:0000313|EMBL:CBL12488.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_326_21
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30423..31148
DNA (726bp) protein (242aa)
glucosamine-6-phosphate isomerase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000313|EMBL:CBL07940.1};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Glucosamine-6-phosphate deaminase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KM38_9FIRM
L1_008_000M1_scaffold_326_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31166..32308
DNA (1143bp) protein (381aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BRL1_9FIRM
L1_008_000M1_scaffold_326_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32515..34095
DNA (1581bp) protein (527aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BA18_9FIRM
L1_008_000M1_scaffold_326_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34471..35523
DNA (1053bp) protein (351aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
S-adenosyl-methyltransferase MraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBK1_9FIRM
L1_008_000M1_scaffold_326_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35477..35662
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KYQ5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12495.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_326_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35756..36646
DNA (891bp) protein (297aa)
pyridoxal phosphate synthase yaaD subunit (EC:4.-.-.-)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KM42_9FIRM
L1_008_000M1_scaffold_326_27
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36757..37359
DNA (603bp) protein (201aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
pyridoxal phosphate synthase yaaE subunit (EC:2.6.-.-)
Glutamine amidotransferase subunit PdxT n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AVH9_9FIRM
L1_008_000M1_scaffold_326_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37442..37615
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Roseburia intestinalis RepID=C7GBJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV00803.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_008_000M1_scaffold_326_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37693..38364
DNA (672bp) protein (224aa)
MATE efflux family protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GBJ4_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEV00801.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
putative efflux protein, MATE family
L1_008_000M1_scaffold_326_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38548..39033
DNA (486bp) protein (162aa)
Uncharacterized protein n=3 Tax=Roseburia intestinalis RepID=C7GBJ2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL12500.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Displaying items 1-30 of 58 in total

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