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L1_008_000M1_scaffold_359

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_359_1
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(389..1471)
DNA (1083bp) protein (361aa)
Spore germination protein (Amino acid permease) n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQ49_9FIRM
Spore germination protein (Amino acid permease) {ECO:0000313|EMBL:EDN01654.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L1_008_000M1_scaffold_359_2
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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comp(1555..2577)
DNA (1023bp) protein (341aa)
Germination protein Ger(X)C family n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HNC8_9FIRM
Germination protein Ger(X)C family {ECO:0000313|EMBL:CCY26106.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_359_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2574..4091)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQ51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01657.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
spore germination protein KA
L1_008_000M1_scaffold_359_4
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

4258..5274
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5H9F2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26108.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_359_5
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

5330..6010
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HDC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26109.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_359_6
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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6282..6770
DNA (489bp) protein (163aa)
Sigma-70 region 2 n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5H8U9_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:CCY26110.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
RNA polymerase sigma factor, sigma-70 family
L1_008_000M1_scaffold_359_7
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

6767..7888
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HND3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26111.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_359_8
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(7989..10637)
DNA (2649bp) protein (883aa)
Calcium-translocating P-type ATPase PMCA-type n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HMW3_9FIRM
Calcium-translocating P-type ATPase PMCA-type {ECO:0000313|EMBL:CCY26112.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
MgtA4; cation transport ATPase
L1_008_000M1_scaffold_359_9
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10834..12156)
DNA (1323bp) protein (441aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
prsA1; Peptidylprolyl isomerase PrsA-like (EC:5.2.1.8)
PPIC-type PPIASE domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQ57_9FIRM
L1_008_000M1_scaffold_359_10
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

12641..13600
DNA (960bp) protein (320aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
prs; phosphoribosyl pyrophosphate synthetase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HDD1_9FIRM
L1_008_000M1_scaffold_359_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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13741..14334
DNA (594bp) protein (198aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJA9_9FIRM
L1_008_000M1_scaffold_359_12
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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14476..17874
DNA (3399bp) protein (1133aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
mfd; Transcription-repair-coupling factor (EC:3.6.4.-)
Transcription-repair-coupling factor n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HND7_9FIRM
L1_008_000M1_scaffold_359_13
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

18035..18487
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HMW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26117.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_359_14
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

18631..19887
DNA (1257bp) protein (419aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5H9G2_9FIRM
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:CCY26118.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_359_15
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

20840..25018
DNA (4179bp) protein (1393aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQR9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26876.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_359_16
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

25353..26438
DNA (1086bp) protein (362aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HAY6_9FIRM
L1_008_000M1_scaffold_359_17
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

26497..27633
DNA (1137bp) protein (379aa)
Phosphoglycerate dehydrogenase and related dehydrogenases (EC:1.1.1.95)
Phosphoglycerate dehydrogenase and related dehydrogenases n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HFI1_9FIRM
Phosphoglycerate dehydrogenase and related dehydrogenases {ECO:0000313|EMBL:CCY26874.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_359_18
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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27645..28142
DNA (498bp) protein (166aa)
Putative acyltransferase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBF1_9FIRM
Putative acyltransferase {ECO:0000313|EMBL:CCY26873.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
anhydrase
L1_008_000M1_scaffold_359_19
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

28228..28884
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HPV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26872.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_359_20
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

28955..29368
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26871.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_359_21
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29640..30242)
DNA (603bp) protein (201aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KIL6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV18757.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L1_008_000M1_scaffold_359_22
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30239..30535)
DNA (297bp) protein (99aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KIL5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK25168.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
hypothetical protein
L1_008_000M1_scaffold_359_23
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(30611..30967)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HPU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26867.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_359_24
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(31039..31257)
DNA (219bp) protein (73aa)
UPF0291 protein BN469_01742 n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQQ6_9FIRM
UPF0291 protein BN469_01742 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_359_25
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(31344..32141)
DNA (798bp) protein (266aa)
S4 domain protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HAX5_9FIRM
S4 domain protein {ECO:0000313|EMBL:CCY26865.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
RNA-binding protein S4
L1_008_000M1_scaffold_359_26
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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32347..33243
DNA (897bp) protein (299aa)
Lipid kinase YegS/Rv2252/BmrU family n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HFG8_9FIRM
Lipid kinase YegS/Rv2252/BmrU family {ECO:0000313|EMBL:CCY26864.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L1_008_000M1_scaffold_359_27
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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33359..33772
DNA (414bp) protein (138aa)
Universal stress family protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBE1_9FIRM
Universal stress family protein {ECO:0000313|EMBL:CCY26863.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
UspA; universal stress protein UspA
L1_008_000M1_scaffold_359_28
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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33837..34283
DNA (447bp) protein (149aa)
Putative universal stress protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HPT8_9FIRM
Putative universal stress protein {ECO:0000313|EMBL:CCY26862.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_359_29
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

34377..34784
DNA (408bp) protein (136aa)
Putative universal stress protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQQ1_9FIRM
Putative universal stress protein {ECO:0000313|EMBL:CCY26861.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_359_30
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

34841..35092
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HAX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26860.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
Displaying items 1-30 of 50 in total

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