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L1_008_000M1_scaffold_360

Search features with annotation key words

Displaying items 31-54 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_360_31
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30781..32301)
DNA (1521bp) protein (507aa)
Solute:sodium symporter (SSS) family transporter n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9L3I8_9FIRM
Solute:sodium symporter (SSS) family transporter {ECO:0000313|EMBL:EOS53108.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
Na+/solute symporter
L1_008_000M1_scaffold_360_32
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32463..33863)
DNA (1401bp) protein (467aa)
Putative lipoprotein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IX34_9FIRM
Putative lipoprotein {ECO:0000313|EMBL:CDE56126.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family
L1_008_000M1_scaffold_360_33
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34069..34347)
DNA (279bp) protein (93aa)
Stage V sporulation protein S n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R8E0_AMMDK
Stage V sporulation protein S {ECO:0000313|EMBL:EYE88200.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
Stage V sporulation protein S
L1_008_000M1_scaffold_360_34
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34513..35358)
DNA (846bp) protein (282aa)
Metallophosphoesterase n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VNU1_CLOSH
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AGC68452.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
L1_008_000M1_scaffold_360_35
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(35379..36977)
DNA (1599bp) protein (533aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; Flags: Precursor;; TaxID=755731 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
Ribonuclease Y n=1 Tax=Clostridium sp. BNL1100 RepID=H2JIW5_9CLOT
hypothetical protein
L1_008_000M1_scaffold_360_36
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37109..39607)
DNA (2499bp) protein (833aa)
Cell divisionFtsK/SpoIIIE n=7 Tax=Clostridium thermocellum RepID=A3DEE8_CLOTH
cell division protein FtsK/SpoIIIE
Cell divisionFtsK/SpoIIIE {ECO:0000313|EMBL:ABN52327.1}; Flags: Precursor;; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L1_008_000M1_scaffold_360_37
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39684..41705)
DNA (2022bp) protein (674aa)
ATP-dependent DNA helicase RecG (EC:3.6.1.-)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:AEV68836.1}; EC=3.6.1.- {ECO:0000313|EMBL:AEV68836.1};; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
ATP-dependent DNA helicase RecG n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LXT3_CLOCD
L1_008_000M1_scaffold_360_38
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

41797..42354
DNA (558bp) protein (186aa)
RNA methyltransferase, RsmD family n=1 Tax=Clostridium termitidis CT1112 RepID=S0FSF3_9CLOT
RNA methyltransferase, RsmD family {ECO:0000313|EMBL:EMS73266.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
methyltransferase
L1_008_000M1_scaffold_360_39
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42358..42846
DNA (489bp) protein (163aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
Phosphopantetheine adenylyltransferase n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R5D1_9CLOT
pantetheine-phosphate adenylyltransferase
L1_008_000M1_scaffold_360_40
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42894..43433
DNA (540bp) protein (180aa)
Pantetheine-phosphate adenylyltransferase n=2 Tax=Clostridium sordellii RepID=T0E4P0_CLOSO
H+-ATPase subunit H,V-type ATP synthase subunit E {ECO:0000313|EMBL:CEK35661.1}; H-ATPase subunit H {ECO:0000313|EMBL:CEP65363.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
conserved hypothetical protein
L1_008_000M1_scaffold_360_41
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(43791..44132)
DNA (342bp) protein (114aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9J4J8_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS76017.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
RNA polymerase, sigma subunit, ECF family
L1_008_000M1_scaffold_360_42
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

comp(44262..45401)
DNA (1140bp) protein (380aa)
Predicted permease n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N4L2_9FIRM
Predicted permease {ECO:0000313|EMBL:CDF07033.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
Predicted permease.
L1_008_000M1_scaffold_360_43
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45406..46098)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JTK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS34547.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
ABC-type antimicrobial peptide transport system, ATPase component
L1_008_000M1_scaffold_360_44
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46091..46672)
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LYE0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL22643.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L1_008_000M1_scaffold_360_45
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(47043..48194)
DNA (1152bp) protein (384aa)
Integrase core domain protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MP11_9FIRM
Integrase core domain protein {ECO:0000313|EMBL:EDS00648.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
transposase IS3/IS911 family protein
L1_008_000M1_scaffold_360_46
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

48348..50936
DNA (2589bp) protein (863aa)
UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase {ECO:0000313|EMBL:KJJ73033.1}; EC=4.2.1.135 {ECO:0000313|EMBL:KJJ73033.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Polysaccharide biosynthesis protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBB2_9CLOT
nucleoside-diphosphate sugar epimerase
L1_008_000M1_scaffold_360_47
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51403..52311)
DNA (909bp) protein (303aa)
Putative membrane protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G9Y4_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDB18076.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
membrane protein
L1_008_000M1_scaffold_360_48
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

52472..53032
DNA (561bp) protein (187aa)
Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HAT5_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDB31004.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
transcriptional regulator
L1_008_000M1_scaffold_360_49
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(53248..54336)
DNA (1089bp) protein (363aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RVE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL67659.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Predicted transcriptional regulators
L1_008_000M1_scaffold_360_50
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54358..54786)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9MNK8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72704.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
hypothetical protein
L1_008_000M1_scaffold_360_51
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54825..55370)
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KM36_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX41379.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L1_008_000M1_scaffold_360_52
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55363..55935)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LDF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET61393.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein
L1_008_000M1_scaffold_360_53
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56012..56743)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZ56_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG74434.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
NADPH-dependent FMN reductase
L1_008_000M1_scaffold_360_54
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(56815..58281)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TE86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC70555.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
Displaying items 31-54 of 54 in total

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