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L1_008_000M1_scaffold_360

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_360_1
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..696)
DNA (696bp) protein (232aa)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Clostridium sp. CAG:352 RepID=R6R1P8_9CLOT
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:CDC37006.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
3-oxoacyl-(acyl-carrier-protein) reductase
L1_008_000M1_scaffold_360_2
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(696..1610)
DNA (915bp) protein (305aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Clostridium leptum CAG:27 RepID=R6N1L0_9CLOT
L1_008_000M1_scaffold_360_3
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1625..2587)
DNA (963bp) protein (321aa)
fabI; enoyl-[acyl-carrier protein] reductase FabI (EC:1.3.1.9)
Putative enoyl-(Acyl-carrier-protein) reductase II n=1 Tax=Clostridium sp. CAG:242 RepID=R6CTP2_9CLOT
Putative enoyl-(Acyl-carrier-protein) reductase II {ECO:0000313|EMBL:CDA78980.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L1_008_000M1_scaffold_360_4
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2601..3563)
DNA (963bp) protein (321aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Clostridium leptum DSM 753 RepID=A7VVV2_9CLOT
L1_008_000M1_scaffold_360_5
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3591..4019)
DNA (429bp) protein (143aa)
Transcriptional regulator n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LJD8_ACEWD
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AFA48701.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC; 1655).;"
L1_008_000M1_scaffold_360_6
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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comp(4212..4529)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TAY3_9STAP
Uncharacterized protein {ECO:0000313|EMBL:CDC70543.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
L1_008_000M1_scaffold_360_7
Firmicutes bacterium CAG:449, Firmicutes, Bacteria

Not on your lists

comp(4613..5287)
DNA (675bp) protein (225aa)
Lipolytic protein G-D-S-L family n=1 Tax=Firmicutes bacterium CAG:449 RepID=R6S4H2_9FIRM
Lipolytic protein G-D-S-L family {ECO:0000313|EMBL:CDC41517.1}; TaxID=1263023 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:449.;"
lysophospholipase L1-like esterase
L1_008_000M1_scaffold_360_8
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5284..6429)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5ZAR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA25877.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
hypothetical protein
L1_008_000M1_scaffold_360_9
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6451..7842)
DNA (1392bp) protein (464aa)
Membrane bound O-acyl transferase MBOAT family protein n=1 Tax=Roseburia sp. CAG:197 RepID=R5YEI1_9FIRM
Membrane bound O-acyl transferase MBOAT family protein {ECO:0000313|EMBL:CDA25878.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
membrane bound O-acyl transferase MBOAT family protein
L1_008_000M1_scaffold_360_10
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(7846..8325)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DSE0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA91403.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
hypothetical protein
L1_008_000M1_scaffold_360_11
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8356..9288)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZHK9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD45585.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
hypothetical protein
L1_008_000M1_scaffold_360_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9407..9931)
DNA (525bp) protein (175aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
5,10-methenyltetrahydrofolate synthetase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IFE5_9CLOT
L1_008_000M1_scaffold_360_13
unknown

Not on your lists

comp(10269..10478)
DNA (210bp) protein (70aa)

This feature has no annotations

L1_008_000M1_scaffold_360_14
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11095..13011)
DNA (1917bp) protein (639aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37720
Uncharacterized protein {ECO:0000313|EMBL:EXM40259.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
hypothetical protein
L1_008_000M1_scaffold_360_15
unknown

Not on your lists

13552..13965
DNA (414bp) protein (138aa)

This feature has no annotations

L1_008_000M1_scaffold_360_16
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13793..15589)
DNA (1797bp) protein (599aa)
Peptidase M56 family protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KVG9_OSCVS
peptidase M56 family protein
Peptidase M56 family protein {ECO:0000313|EMBL:BAL00602.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L1_008_000M1_scaffold_360_17
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15579..15974)
DNA (396bp) protein (132aa)
Transcriptional regulator, BlaI/MecI/CopY family n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NT95_9FIRM
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:EDN00658.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
BlaI family transcriptional regulator
L1_008_000M1_scaffold_360_18
unknown

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comp(16112..16324)
DNA (213bp) protein (71aa)

This feature has no annotations

L1_008_000M1_scaffold_360_19
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16344..17492)
DNA (1149bp) protein (383aa)
sodium ion-translocating decarboxylase, beta subunit (EC:4.1.1.41 4.1.1.3)
Sodium ion-translocating decarboxylase beta subunit n=1 Tax=Eubacterium sp. CAG:841 RepID=R7G001_9FIRM
Sodium ion-translocating decarboxylase beta subunit {ECO:0000313|EMBL:CDE20113.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
L1_008_000M1_scaffold_360_20
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17603..18469
DNA (867bp) protein (289aa)
SNARE-like domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9K5_9CLOT
SNARE-like domain protein {ECO:0000313|EMBL:EEG31770.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L1_008_000M1_scaffold_360_21
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18456..21776
DNA (3321bp) protein (1107aa)
Endopygalactorunase-like protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6STI3_9CLOT
Endopygalactorunase-like protein {ECO:0000313|EMBL:CDC60849.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
O-6-methylguanine DNA methyltransferase
L1_008_000M1_scaffold_360_22
unknown

Not on your lists

comp(21773..22189)
DNA (417bp) protein (139aa)

This feature has no annotations

L1_008_000M1_scaffold_360_23
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(22239..22826)
DNA (588bp) protein (196aa)
cell division protein SepF n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B3A03C
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L1_008_000M1_scaffold_360_24
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22899..23588)
DNA (690bp) protein (230aa)
Pyridoxal phosphate enzyme, YggS family n=1 Tax=Clostridium termitidis CT1112 RepID=S0FIG8_9CLOT
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:EMS71770.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
pyridoxal phosphate enzyme, YggS family
L1_008_000M1_scaffold_360_25
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23593..25263)
DNA (1671bp) protein (557aa)
Chromosome partition protein smc {ECO:0000313|EMBL:GAE87714.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
L1_008_000M1_scaffold_360_26
Caldicellulosiruptor saccharolyticus, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25263..25694)
DNA (432bp) protein (144aa)
amino acid-binding protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D95B
amino acid-binding ACT domain-containing protein
Amino acid-binding ACT domain protein {ECO:0000313|EMBL:ABP67635.1}; TaxID=351627 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903 /; Tp8T 6331).;"
L1_008_000M1_scaffold_360_27
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25780..27084)
DNA (1305bp) protein (435aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
Coenzyme F390 synthetase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FJG4_9CLOT
phenylacetate-CoA ligase
L1_008_000M1_scaffold_360_28
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27081..27665)
DNA (585bp) protein (195aa)
Indolepyruvate ferredoxin oxidoreductase, beta subunit n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LT97_CLOCD
indolepyruvate ferredoxin oxidoreductase subunit beta
Indolepyruvate ferredoxin oxidoreductase, beta subunit {ECO:0000313|EMBL:ABN51849.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
L1_008_000M1_scaffold_360_29
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27668..29416)
DNA (1749bp) protein (583aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
Indolepyruvate ferredoxin oxidoreductase, alpha subunit n=4 Tax=Clostridium thermocellum RepID=E6USL5_CLOTL
indolepyruvate ferredoxin oxidoreductase subunit alpha
L1_008_000M1_scaffold_360_30
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29445..30737)
DNA (1293bp) protein (431aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
Phenylacetate--CoA ligase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T9X8_9CLOT
phenylacetate--CoA ligase
Displaying items 1-30 of 54 in total

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