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L1_008_000M1_scaffold_364

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_364_1
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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110..340
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P400_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDS20629.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
hypothetical protein
L1_008_000M1_scaffold_364_2
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(406..1512)
DNA (1107bp) protein (369aa)
Radical SAM domain protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C0U4_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:CDD70958.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
Predicted Fe-S oxidoreductases
L1_008_000M1_scaffold_364_3
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(1568..1975)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BYJ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD70959.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
hypothetical protein
L1_008_000M1_scaffold_364_4
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

2324..2761
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C1C3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD71929.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
L1_008_000M1_scaffold_364_5
unknown

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comp(3321..4520)
DNA (1200bp) protein (400aa)
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108, ECO:0000313|EMBL:CBL39286.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Isocitrate dehydrogenase [NADP] n=2 Tax=Clostridiales RepID=D4MV70_9FIRM
L1_008_000M1_scaffold_364_6
unknown

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comp(4619..5341)
DNA (723bp) protein (241aa)
Transcriptional regulator, GntR family n=1 Tax=butyrate-producing bacterium SSC/2 RepID=D4MV69_9FIRM
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CBL39285.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_364_7
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5493..6203
DNA (711bp) protein (237aa)
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Deoxyribose-phosphate aldolase n=2 Tax=Clostridiales RepID=D4MV68_9FIRM
L1_008_000M1_scaffold_364_8
unknown

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6227..6802
DNA (576bp) protein (192aa)
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000313|EMBL:CBL39283.1}; EC=5.3.1.9 {ECO:0000313|EMBL:CBL39283.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Glucose-6-phosphate isomerase n=2 Tax=Clostridiales RepID=D4MV67_9FIRM
L1_008_000M1_scaffold_364_9
unknown

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comp(6889..8601)
DNA (1713bp) protein (571aa)
hydrogenases, Fe-only (EC:1.6.5.3)
Hydrogenases, Fe-only {ECO:0000313|EMBL:CBL39282.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CBL39282.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Hydrogenases, Fe-only n=2 Tax=Clostridiales RepID=D4MV66_9FIRM
L1_008_000M1_scaffold_364_10
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8595..10427)
DNA (1833bp) protein (611aa)
NADPH-dependent glutamate synthase beta chain and related oxidoreductases n=2 Tax=Clostridiales RepID=D4MV65_9FIRM
NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EDS20617.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L1_008_000M1_scaffold_364_11
unknown

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comp(10366..10563)
DNA (198bp) protein (66aa)

This feature has no annotations

L1_008_000M1_scaffold_364_12
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10795..11631)
DNA (837bp) protein (279aa)
EDD domain protein, DegV family n=3 Tax=Clostridiales RepID=D4MV64_9FIRM
EDD domain protein, DegV family
EDD domain protein, DegV family {ECO:0000313|EMBL:EKY21909.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_364_13
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11756..12238)
DNA (483bp) protein (161aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=B0P3Y6_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKY21910.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_364_14
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12330..13697)
DNA (1368bp) protein (456aa)
Trypsin n=2 Tax=Lachnospiraceae RepID=E5VLV7_9FIRM
Trypsin {ECO:0000313|EMBL:EFV16146.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L1_008_000M1_scaffold_364_15
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13956..15386
DNA (1431bp) protein (477aa)
Undecaprenyl-phosphate glucose phosphotransferase n=4 Tax=Clostridiales RepID=D4MV61_9FIRM
Undecaprenyl-phosphate glucose phosphotransferase
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:CDA32683.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_364_16
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15466..16515
DNA (1050bp) protein (350aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R5Z7K2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA32684.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
cell envelope-related function transcriptional attenuator common domain
L1_008_000M1_scaffold_364_17
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16589..17758)
DNA (1170bp) protein (390aa)
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q2J2_9FIRM
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase {ECO:0000313|EMBL:EKY21915.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
L1_008_000M1_scaffold_364_18
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17767..18702)
DNA (936bp) protein (312aa)
Glycosyltransferases involved in cell wall biogenesis n=5 Tax=Clostridiales RepID=D4MV58_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyl transferase family 2 {ECO:0000313|EMBL:CDA32686.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_364_19
unknown

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comp(18746..19918)
DNA (1173bp) protein (391aa)
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase n=2 Tax=Clostridiales RepID=B0P3Y0_9CLOT
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC {ECO:0000313|EMBL:CBL39273.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_364_20
unknown

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comp(19929..21989)
DNA (2061bp) protein (687aa)
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily n=2 Tax=Clostridiales RepID=D4MV56_9FIRM
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily {ECO:0000313|EMBL:CBL39272.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L1_008_000M1_scaffold_364_21
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22129..22539)
DNA (411bp) protein (137aa)
Glycerol-3-phosphate cytidylyltransferase (EC:2.7.7.39)
Glycerol-3-phosphate cytidylyltransferase {ECO:0000313|EMBL:EDS20607.1}; EC=2.7.7.39 {ECO:0000313|EMBL:EDS20607.1};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Glycerol-3-phosphate cytidylyltransferase n=5 Tax=Clostridiales RepID=D4MV55_9FIRM
L1_008_000M1_scaffold_364_22
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22563..23303)
DNA (741bp) protein (247aa)
ABC-type polysaccharide/polyol phosphate transport system, ATPase component n=5 Tax=Clostridiales RepID=D4MV54_9FIRM
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
ABC transporter {ECO:0000313|EMBL:CDA32690.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_364_23
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23313..24089)
DNA (777bp) protein (259aa)
ABC-2 type transporter n=4 Tax=Clostridiales RepID=B0P3X6_9CLOT
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
L1_008_000M1_scaffold_364_24
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24163..25218)
DNA (1056bp) protein (352aa)
Acyltransferase n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZUC0_9FIRM
Acyltransferase {ECO:0000313|EMBL:CDA32692.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Fucose 4-O-acetylase and related acetyltransferases
L1_008_000M1_scaffold_364_25
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25220..28873)
DNA (3654bp) protein (1218aa)
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q1T6_9FIRM
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase {ECO:0000313|EMBL:EKY21923.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
L1_008_000M1_scaffold_364_26
unknown

Not on your lists

comp(28939..32376)
DNA (3438bp) protein (1146aa)
Glycosyltransferase, group 2 family protein n=2 Tax=Clostridiales RepID=B0P3X3_9CLOT
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC {ECO:0000313|EMBL:CBL39268.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
L1_008_000M1_scaffold_364_27
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32386..33861)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P3X2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDS20601.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
hypothetical protein
L1_008_000M1_scaffold_364_28
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33858..34988)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q210_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY21926.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Acyltransferase family.
L1_008_000M1_scaffold_364_29
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35157..36674
DNA (1518bp) protein (506aa)
Bacterial group 2 Ig-like protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q2U3_9FIRM
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:EKY21927.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Uncharacterized proteins, LmbE homologs
L1_008_000M1_scaffold_364_30
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36741..38759)
DNA (2019bp) protein (673aa)
Uncharacterized protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q1U1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY21928.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
Displaying items 1-30 of 49 in total

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