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L1_008_000M1_scaffold_382

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_382_1
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(920..2551)
DNA (1632bp) protein (544aa)
Resolvase N-terminal domain protein n=3 Tax=root RepID=R6IVS2_9FIRM
Resolvase N-terminal domain protein {ECO:0000313|EMBL:CDC37880.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
resolvase domain-containing protein
L1_008_000M1_scaffold_382_2
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2573..3415)
DNA (843bp) protein (281aa)
Recombinase n=2 Tax=Clostridiales RepID=R6HVZ6_9FIRM
Recombinase {ECO:0000313|EMBL:CDB42058.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L1_008_000M1_scaffold_382_3
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3418..4965)
DNA (1548bp) protein (516aa)
Resolvase n-terminal:recombinase putative n=1 Tax=Clostridium sp. CAG:352 RepID=R6R457_9CLOT
Resolvase n-terminal:recombinase putative {ECO:0000313|EMBL:CDC37886.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
resolvase, n-terminal:recombinase
L1_008_000M1_scaffold_382_4

Not on your lists

comp(5072..5251)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1U6U2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC73985.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L1_008_000M1_scaffold_382_5
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5264..5701)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QY44_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37889.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
resolvase-like protein
L1_008_000M1_scaffold_382_6
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5745..6524)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R462_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37891.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L1_008_000M1_scaffold_382_7
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6538..8493)
DNA (1956bp) protein (652aa)
Uncharacterized protein n=2 Tax=root RepID=R6QMP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37893.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Rad3-related DNA helicases
L1_008_000M1_scaffold_382_8
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9050..9475)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QQ18_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37895.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L1_008_000M1_scaffold_382_9
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(9733..10122)
DNA (390bp) protein (130aa)
Inner membrane protein YbaN n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H882_9FIRM
Inner membrane protein YbaN {ECO:0000313|EMBL:CDB30109.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L1_008_000M1_scaffold_382_10
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10119..10460)
DNA (342bp) protein (114aa)
Putative cytoplasmic protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5I7J3_9FIRM
Putative cytoplasmic protein {ECO:0000313|EMBL:CCY32751.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Nitrous oxide-stimulated promoter.
L1_008_000M1_scaffold_382_11
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10460..12118)
DNA (1659bp) protein (553aa)
Thiol reductant ABC exporter CydC subunit n=1 Tax=Clostridium sp. CAG:352 RepID=R6QMQ0_9CLOT
Thiol reductant ABC exporter CydC subunit {ECO:0000313|EMBL:CDC37898.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
ABC transporter-like protein
L1_008_000M1_scaffold_382_12
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12115..13857)
DNA (1743bp) protein (581aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QY54_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC37899.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
ABC transporter
L1_008_000M1_scaffold_382_13
unknown

Not on your lists

comp(13844..13981)
DNA (138bp) protein (46aa)

This feature has no annotations

L1_008_000M1_scaffold_382_14
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13974..14357)
DNA (384bp) protein (128aa)
Iron dependent repressor DNA binding domain protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QQ24_9CLOT
Iron dependent repressor DNA binding domain protein {ECO:0000313|EMBL:CDC37900.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
transcriptional regulator
L1_008_000M1_scaffold_382_15
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14397..15173)
DNA (777bp) protein (259aa)
ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components (EC:3.6.3.34)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R474_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC37901.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L1_008_000M1_scaffold_382_16
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15821..16666)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RTX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37902.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L1_008_000M1_scaffold_382_17
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16708..17514)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QY59_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37904.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
O-Methyltransferase involved in polyketide biosynthesis
L1_008_000M1_scaffold_382_18
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17546..18328)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R479_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37906.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Predicted divalent heavy-metal cations transporter
L1_008_000M1_scaffold_382_19

Not on your lists

comp(18345..18602)
DNA (258bp) protein (86aa)
Copper chaperone (Fragment) n=1 Tax=human gut metagenome RepID=K1TS47_9ZZZZ
Copper chaperone {ECO:0000313|EMBL:EKC75907.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Copper chaperone
L1_008_000M1_scaffold_382_20
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18818..20551)
DNA (1734bp) protein (578aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Clostridium sp. CAG:352 RepID=R6RTY1_9CLOT
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CDC37907.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
ABC-type multidrug transport system, ATPase and permease components
L1_008_000M1_scaffold_382_21
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20553..22325)
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QMR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37908.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
ABC-type multidrug transport system, ATPase and permease components
L1_008_000M1_scaffold_382_22
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22434..23027)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QY66_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37909.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
transcriptional regulator, TetR family
L1_008_000M1_scaffold_382_23
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23199..25301)
DNA (2103bp) protein (701aa)
Heavy metal translocating P-type ATPase n=1 Tax=Clostridium sp. CAG:352 RepID=R6R484_9CLOT
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:CDC37911.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase
L1_008_000M1_scaffold_382_24
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25352..25627)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QMR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37913.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L1_008_000M1_scaffold_382_25
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25780..26709)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6R489_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37916.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
L1_008_000M1_scaffold_382_26
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26844..28592)
DNA (1749bp) protein (583aa)
Peptidase M23 family n=2 Tax=root RepID=R6QMS6_9CLOT
Peptidase M23 family {ECO:0000313|EMBL:CDC37918.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L1_008_000M1_scaffold_382_27
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28665..31013)
DNA (2349bp) protein (783aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VUN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO60684.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Domain of unknown function DUF87.
L1_008_000M1_scaffold_382_28
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31466..32173)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RTZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC37922.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L1_008_000M1_scaffold_382_29
unknown

Not on your lists

32337..32771
DNA (435bp) protein (145aa)

This feature has no annotations

L1_008_000M1_scaffold_382_30
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32776..34608)
DNA (1833bp) protein (611aa)
TraG/TraD family protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6S2Z5_9CLOT
TraG/TraD family protein {ECO:0000313|EMBL:CDC40992.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Type IV secretory pathway, VirD4 components
Displaying items 1-30 of 78 in total

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