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L1_008_000M1_scaffold_387

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_387_1
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(100..1023)
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CX37_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EEK81118.1}; TaxID=526977 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus ATCC 4342.;"
hypothetical protein
L1_008_000M1_scaffold_387_2
unknown

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comp(1242..1817)
DNA (576bp) protein (192aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P1A8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL38364.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_387_3
unknown

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comp(1820..2359)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=D4N0G8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL38363.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_387_4
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2367..2687)
DNA (321bp) protein (107aa)
Stage III sporulation protein AF n=2 Tax=Lachnospiraceae RepID=L1Q6Z3_9FIRM
Stage III sporulation protein AF {ECO:0000313|EMBL:EKY23696.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Stage III sporulation protein AF (Spore_III_AF).
L1_008_000M1_scaffold_387_5
unknown

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comp(2816..3943)
DNA (1128bp) protein (376aa)
Stage III sporulation protein AE (Spore_III_AE) n=2 Tax=Clostridiales RepID=D4N0G6_9FIRM
Stage III sporulation protein AE (spore_III_AE).
Stage III sporulation protein AE (Spore_III_AE) {ECO:0000313|EMBL:CBL38361.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_387_6
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3940..4329)
DNA (390bp) protein (130aa)
Stage III sporulation protein AD n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z0F8_9FIRM
Stage III sporulation protein AD {ECO:0000313|EMBL:CDA33193.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Stage III sporulation protein AC/AD protein family.
L1_008_000M1_scaffold_387_7
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4351..4548)
DNA (198bp) protein (66aa)
Stage III sporulation protein AC n=6 Tax=Firmicutes RepID=D4N0G4_9FIRM
stage III sporulation protein AC
Stage III sporulation protein AC {ECO:0000313|EMBL:CDA33194.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_387_8
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4585..5076)
DNA (492bp) protein (164aa)
Putative stage III sporulation protein AB n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z2F8_9FIRM
Putative stage III sporulation protein AB {ECO:0000313|EMBL:CDA33195.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
sporulation stage III protein AB
L1_008_000M1_scaffold_387_9
unknown

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comp(5100..6026)
DNA (927bp) protein (309aa)
Stage III sporulation protein AA n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VK26_9FIRM
stage III sporulation protein AA
Stage III sporulation protein AA {ECO:0000313|EMBL:CBL38358.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_387_10
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6100..8079)
DNA (1980bp) protein (660aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518};; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Topoisomerase IA (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Clostridium sp. SS2/1 RepID=B0P1B6_9CLOT
L1_008_000M1_scaffold_387_11
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8221..8859
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q6S5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY23689.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Uncharacterised ACR, YkgG family COG1556.
L1_008_000M1_scaffold_387_12
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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9054..9992
DNA (939bp) protein (313aa)
AraC family Bacterial regulatory helix-turn-helix protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z8W2_9FIRM
AraC family Bacterial regulatory helix-turn-helix protein {ECO:0000313|EMBL:CDA33199.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
AraC-type DNA-binding domain-containing proteins
L1_008_000M1_scaffold_387_13
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9961..10350)
DNA (390bp) protein (130aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=L1Q7U4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY23687.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L1_008_000M1_scaffold_387_14
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10376..11884)
DNA (1509bp) protein (503aa)
Ykud domain-containing protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZG67_9FIRM
Ykud domain-containing protein {ECO:0000313|EMBL:CDA33201.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
hypothetical protein
L1_008_000M1_scaffold_387_15
unknown

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comp(11903..13138)
DNA (1236bp) protein (412aa)
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:CBL38353.1}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:CBL38353.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Serine hydroxymethyltransferase n=5 Tax=Clostridiales RepID=D4N0F8_9FIRM
L1_008_000M1_scaffold_387_16
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13231..13701)
DNA (471bp) protein (157aa)
ACT domain-containing protein n=3 Tax=Lachnospiraceae RepID=E5VK33_9FIRM
ACT domain-containing protein {ECO:0000313|EMBL:EFV16772.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Aspartokinases
L1_008_000M1_scaffold_387_17
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13706..15499)
DNA (1794bp) protein (598aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q6U8_9FIRM
Aspartate--tRNA ligase {ECO:0000313|EMBL:EKY23683.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_387_18
unknown

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comp(15576..16094)
DNA (519bp) protein (173aa)
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family n=4 Tax=Clostridiales RepID=D4N0F5_9FIRM
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family {ECO:0000313|EMBL:CBL38350.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_387_19
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16180..17424)
DNA (1245bp) protein (415aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=2 Tax=Lachnospiraceae RepID=E5VK36_9FIRM
L1_008_000M1_scaffold_387_20
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17421..18044)
DNA (624bp) protein (208aa)
Uncharacterized domain HDIG n=4 Tax=Clostridiales RepID=D4N0F3_9FIRM
uncharacterized domain HDIG
HD domain-containing protein {ECO:0000313|EMBL:EFV16776.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L1_008_000M1_scaffold_387_21
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18059..19489)
DNA (1431bp) protein (477aa)
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases (EC:1.3.99.22)
Radical SAM superfamily protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VK38_9FIRM
Radical SAM superfamily protein {ECO:0000313|EMBL:EFV16777.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L1_008_000M1_scaffold_387_22
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19493..20152)
DNA (660bp) protein (220aa)
Zn-dependent hydrolases, including glyoxylases n=2 Tax=Clostridiales RepID=D4N0F1_9FIRM
Zn-dependent hydrolases, including glyoxylases
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EDS21679.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L1_008_000M1_scaffold_387_23
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20161..22458)
DNA (2298bp) protein (766aa)
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
RelA/SpoT family protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z8X2_9FIRM
RelA/SpoT family protein {ECO:0000313|EMBL:CDA33209.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_387_24
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22485..22904)
DNA (420bp) protein (140aa)
Aspartate carbamoyltransferase, regulatory subunit n=5 Tax=Clostridiales RepID=D4N0E9_9FIRM
Aspartate carbamoyltransferase, regulatory subunit
Aspartate carbamoyltransferase {ECO:0000313|EMBL:EFV16780.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L1_008_000M1_scaffold_387_25
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22894..23820)
DNA (927bp) protein (309aa)
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Aspartate carbamoyltransferase n=3 Tax=Clostridiales RepID=D4N0E8_9FIRM
L1_008_000M1_scaffold_387_26
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23880..24779)
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VK43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV16782.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
hypothetical protein
L1_008_000M1_scaffold_387_27
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24818..25228)
DNA (411bp) protein (137aa)
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase {ECO:0000256|SAAS:SAAS00094203}; EC=2.1.1.177 {ECO:0000256|SAAS:SAAS00094203};; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5Z0H1_9FIRM
hypothetical protein
L1_008_000M1_scaffold_387_28
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25234..25908)
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P0Z9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKY23672.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Bacterial SH3 domain.
L1_008_000M1_scaffold_387_29
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26109..26555
DNA (447bp) protein (149aa)
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase {ECO:0000256|SAAS:SAAS00094203}; EC=2.1.1.177 {ECO:0000256|SAAS:SAAS00094203};; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Uncharacterized conserved protein n=4 Tax=Clostridiales RepID=D4N0E3_9FIRM
hypothetical protein
L1_008_000M1_scaffold_387_30
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26552..26959)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZG79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA33216.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
conserved hypothetical protein TIGR00051
Displaying items 1-30 of 92 in total

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