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L1_008_000M1_scaffold_388

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_388_1
Chlorobium chlorochromatii, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(3..110)
DNA (108bp) protein (36aa)
Putative uncharacterized protein n=1 Tax=Chlorobium chlorochromatii (strain CaD3) RepID=Q3AT04_CHLCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB27871.1}; TaxID=340177 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium chlorochromatii (strain CaD3).;"
L1_008_000M1_scaffold_388_2
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(282..581)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J2T2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY43227.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L1_008_000M1_scaffold_388_3
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(614..835)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B319AE
Uncharacterized protein {ECO:0000313|EMBL:CCY43227.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L1_008_000M1_scaffold_388_4
unknown

Not on your lists

comp(1017..1220)
DNA (204bp) protein (68aa)

This feature has no annotations

L1_008_000M1_scaffold_388_5
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

1570..2577
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H5M7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29224.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L1_008_000M1_scaffold_388_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2574..4106
DNA (1533bp) protein (511aa)
Type I restriction-modification system methyltransferase subunit (EC:2.1.1.72)
Type I restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:CBK99259.1}; EC=2.1.1.72 {ECO:0000313|EMBL:CBK99259.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Type I restriction-modification system methyltransferase subunit n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ10_9FIRM
L1_008_000M1_scaffold_388_7
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4103..5221
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5V0I8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ84103.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
type I restriction-modification system subunit S
L1_008_000M1_scaffold_388_8
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5218..6270
DNA (1053bp) protein (351aa)
restriction endonuclease S n=1 Tax=Butyrivibrio sp. XPD2006 RepID=UPI0003B3C05D
Restriction endonuclease subunit S {ECO:0000313|EMBL:EXM40714.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
restriction modification system DNA specificity domain-containing protein
L1_008_000M1_scaffold_388_9
Lachnospiraceae bacterium oral taxon 082, Clostridiales, Clostridia, Firmicutes, Bacteria

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6267..7400
DNA (1134bp) protein (378aa)
putative type I restriction modification system protein (EC:3.1.21.3)
Type I restriction modification DNA specificity domain protein n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LZR5_9FIRM
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EHO49098.1}; TaxID=861454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium oral taxon 082 str. F0431.;"
L1_008_000M1_scaffold_388_10
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

7453..8448
DNA (996bp) protein (332aa)
Site-specific recombinase phage integrase family n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HAE9_9FIRM
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDB30496.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
int; putative integrase
L1_008_000M1_scaffold_388_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8441..9085
DNA (645bp) protein (215aa)
Restriction endonuclease S subunits (EC:3.1.21.3)
Restriction endonuclease S subunits {ECO:0000313|EMBL:CBK99258.1}; EC=3.1.21.3 {ECO:0000313|EMBL:CBK99258.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Restriction endonuclease S subunits n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ09_9FIRM
L1_008_000M1_scaffold_388_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9064..12435
DNA (3372bp) protein (1124aa)
Type I site-specific restriction-modification system, R (Restriction) subunit and related helicases {ECO:0000313|EMBL:CBK99253.1}; EC=3.1.21.3 {ECO:0000313|EMBL:CBK99253.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Type I site-specific restriction-modification system, R (restriction) subunit and related helicases (EC:3.1.21.3)
Type I site-specific restriction-modification system, R (Restriction) subunit and related helicases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JZ04_9FIRM
L1_008_000M1_scaffold_388_13
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(12506..13015)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I0E8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB43648.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
hypothetical protein
L1_008_000M1_scaffold_388_14
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13150..13455
DNA (306bp) protein (102aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AMU8_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCX42102.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
Helix-turn-helix.
L1_008_000M1_scaffold_388_15
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

13629..14834
DNA (1206bp) protein (402aa)
Site-specific recombinase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IE30_9FIRM
Site-specific recombinase {ECO:0000313|EMBL:CDB43646.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
site-specific recombinase
L1_008_000M1_scaffold_388_16
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

14836..15297
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I2X9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB43645.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
hypothetical protein
L1_008_000M1_scaffold_388_17
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

15500..16096
DNA (597bp) protein (199aa)
LexA repressor {ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.- {ECO:0000256|SAAS:SAAS00273293};; EC=3.4.21.88 {ECO:0000256|SAAS:SAAS00008054};; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
SOS regulatory protein LexA (EC:3.4.21.88)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CTZ5_9FIRM
L1_008_000M1_scaffold_388_18
unknown

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16112..16384
DNA (273bp) protein (91aa)

This feature has no annotations

L1_008_000M1_scaffold_388_19
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

16428..17714
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D688_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX71401.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
DNA repair protein
L1_008_000M1_scaffold_388_20
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

17692..18015
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D3E3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX71402.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
hypothetical protein
L1_008_000M1_scaffold_388_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18030..18230
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CGZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31531.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L1_008_000M1_scaffold_388_22
unknown

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18269..18484
DNA (216bp) protein (72aa)

This feature has no annotations

L1_008_000M1_scaffold_388_23
Sporosarcina newyorkensis, Sporosarcina, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18775..19116
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Sporosarcina newyorkensis 2681 RepID=F9DR54_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGQ26743.1}; TaxID=1027292 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Sporosarcina.;" source="Sporosarcina newyorkensis 2681.;"
Helix-turn-helix, type 11 containing protein
L1_008_000M1_scaffold_388_24
Syntrophomonas zehnderi, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19113..19430
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MGA6_ALKOO
Uncharacterized {ECO:0000313|EMBL:CFX97365.1}; TaxID=690567 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas zehnderi OL-4.;"
hypothetical protein
L1_008_000M1_scaffold_388_25
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19427..19834
DNA (408bp) protein (136aa)
HNH endonuclease n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5WA37_9FIRM
HNH endonuclease {ECO:0000313|EMBL:CCZ92631.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
HNH endonuclease
L1_008_000M1_scaffold_388_26
Syntrophomonas zehnderi, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19824..21146
DNA (1323bp) protein (441aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FA44_9CLOT
SNF2-related {ECO:0000313|EMBL:CFX97331.1}; TaxID=690567 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas zehnderi OL-4.;"
DNA/RNA helicase
L1_008_000M1_scaffold_388_27
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21151..21561
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YD51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF66108.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L1_008_000M1_scaffold_388_28
Pseudoramibacter alactolyticus, Pseudoramibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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21579..22298
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MKA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV00626.1}; TaxID=887929 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Pseudoramibacter.;" source="Pseudoramibacter alactolyticus ATCC 23263.;"
hypothetical protein
L1_008_000M1_scaffold_388_29
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22362..24299
DNA (1938bp) protein (646aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FA41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF06753.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
polA; DNA polymerase i
L1_008_000M1_scaffold_388_30
Selenomonas sp. oral taxon 892, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24292..24747
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003786408
Uncharacterized protein {ECO:0000313|EMBL:ERJ95660.1}; TaxID=1321786 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. oral taxon 892 str. F0426.;"
hypothetical protein
Displaying items 1-30 of 66 in total

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