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L1_008_000M1_scaffold_391

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_391_1
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(42..1352)
DNA (1311bp) protein (437aa)
Tetratricopeptide repeat protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MX05_9BACT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EDS02222.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L1_008_000M1_scaffold_391_2
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1457..1873
DNA (417bp) protein (139aa)
OsmC-like protein n=2 Tax=Alistipes RepID=B0MX03_9BACT
OsmC-like protein {ECO:0000313|EMBL:CDE63064.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
redox protein, regulator of disulfide bond formation
L1_008_000M1_scaffold_391_3
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1936..3177)
DNA (1242bp) protein (414aa)
transporter n=1 Tax=Alistipes senegalensis RepID=UPI000306BBEE
Outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:CBK63682.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L1_008_000M1_scaffold_391_4
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3181..6216)
DNA (3036bp) protein (1012aa)
multidrug transporter AcrB n=1 Tax=Alistipes onderdonkii RepID=UPI00036C90F7
Cation/multidrug efflux pump {ECO:0000313|EMBL:AFL78993.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
cation/multidrug efflux pump
L1_008_000M1_scaffold_391_5
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6224..7258)
DNA (1035bp) protein (345aa)
RND family efflux transporter, MFP subunit n=2 Tax=Alistipes RepID=I3YPS4_ALIFI
RND family efflux transporter MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AFL78992.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_008_000M1_scaffold_391_6
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7319..8428)
DNA (1110bp) protein (370aa)
DoxX n=1 Tax=Alistipes sp. CAG:268 RepID=R6WTI1_9BACT
DoxX {ECO:0000313|EMBL:CDC97377.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
DoxX.
L1_008_000M1_scaffold_391_7
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8425..9114)
DNA (690bp) protein (230aa)
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
Thymidylate kinase n=2 Tax=Alistipes RepID=D4IL66_9BACT
L1_008_000M1_scaffold_391_8
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9134..10351)
DNA (1218bp) protein (406aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
cysteine desulfurase (EC:2.8.1.7 4.4.1.16)
Cysteine desulfurase n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MX00_9BACT
L1_008_000M1_scaffold_391_9
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10354..11184)
DNA (831bp) protein (277aa)
ABC-type transport system involved in Fe-S cluster assembly permease component n=1 Tax=Alistipes sp. CAG:53 RepID=R5W9I0_9BACT
ABC-type transport system involved in Fe-S cluster assembly permease component {ECO:0000313|EMBL:CCZ96824.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
ABC-type transport system involved in Fe-S cluster assembly, permease component
L1_008_000M1_scaffold_391_10
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11186..11938)
DNA (753bp) protein (251aa)
FeS assembly ATPase SufC n=2 Tax=Alistipes RepID=I3YPR9_ALIFI
FeS assembly ATPase SufC
FeS assembly ATPase SufC {ECO:0000313|EMBL:AFL78987.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_008_000M1_scaffold_391_11
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11926..12504)
DNA (579bp) protein (193aa)
iron-sulfur protein n=1 Tax=Alistipes sp. JC136 RepID=UPI000288EB59
Flavin reductase {ECO:0000313|EMBL:CCZ76495.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
iron-sulfur protein
L1_008_000M1_scaffold_391_12
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12511..13959)
DNA (1449bp) protein (483aa)
FeS assembly protein SufB n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JJH8_9BACT
FeS assembly protein SufB {ECO:0000313|EMBL:CDE63072.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Iron-regulated ABC transporter membrane component SufB
L1_008_000M1_scaffold_391_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14424..14957
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI0003697F26
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EFR54347.1}; TaxID=457424 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis 3_1_12.;"
putative two-component system response regulator
L1_008_000M1_scaffold_391_14
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15000..15923
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031C175B
hypothetical protein
Hypothethical protein {ECO:0000313|EMBL:CBJ35928.1}; TaxID=305 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum (Pseudomonas solanacearum).;"
L1_008_000M1_scaffold_391_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16043..16576)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRI4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26323.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_008_000M1_scaffold_391_16
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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16806..17036
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IU49_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGJ99182.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
L1_008_000M1_scaffold_391_17
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17117..18619)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JJH1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE63826.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L1_008_000M1_scaffold_391_18
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18654..21467)
DNA (2814bp) protein (938aa)
TonB-dependent receptor n=5 Tax=root RepID=B0MT75_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:EDS04543.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
TonB-dependent receptor
L1_008_000M1_scaffold_391_19
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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21617..23377
DNA (1761bp) protein (587aa)
Alpha amylase, catalytic domain protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MX78_9BACT
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EDS02183.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
glycoside hydrolase family protein
L1_008_000M1_scaffold_391_20
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23562..24530)
DNA (969bp) protein (323aa)
manganese catalase n=1 Tax=Alistipes onderdonkii RepID=UPI00035C22AE
Mn-containing catalase {ECO:0000313|EMBL:CDD26334.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Mn-containing catalase
L1_008_000M1_scaffold_391_21
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24888..26552)
DNA (1665bp) protein (555aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C3QVE5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO55929.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
hypothetical protein
L1_008_000M1_scaffold_391_22
unknown

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26991..27404
DNA (414bp) protein (138aa)

This feature has no annotations

L1_008_000M1_scaffold_391_23
unknown

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comp(27526..28317)
DNA (792bp) protein (264aa)
hypothetical protein
L1_008_000M1_scaffold_391_24
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28670..30349)
DNA (1680bp) protein (560aa)
Tetratricopeptide repeat protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YPC8_ALIFI
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:AFL78846.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_008_000M1_scaffold_391_25
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30374..31006)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MT23_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04399.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L1_008_000M1_scaffold_391_26
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31026..33710)
DNA (2685bp) protein (895aa)
FtsK/SpoIIIE family protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JHD9_9BACT
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:CDE63161.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
DNA segregation ATPase FtsK/SpoIIIE and related proteins
L1_008_000M1_scaffold_391_27
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33819..34586)
DNA (768bp) protein (256aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Alistipes sp. CAG:268 RepID=R6VQB4_9BACT
L1_008_000M1_scaffold_391_28
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34579..35103)
DNA (525bp) protein (175aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JHT3_9BACT
L1_008_000M1_scaffold_391_29
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35108..37822)
DNA (2715bp) protein (905aa)
DNA gyrase/topoisomerase IV A subunit n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y437_9BACT
DNA gyrase/topoisomerase IV A subunit {ECO:0000313|EMBL:CDD26069.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
type IIA topoisomerase subunit A
L1_008_000M1_scaffold_391_30
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37838..39706)
DNA (1869bp) protein (623aa)
Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit n=1 Tax=Alistipes sp. CAG:29 RepID=R6XWR9_9BACT
Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit {ECO:0000313|EMBL:CDD26070.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
type IIA topoisomerase subunit B
Displaying items 1-30 of 40 in total

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