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L1_008_000M1_scaffold_405

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_405_1
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..1130)
DNA (1128bp) protein (376aa)
C4-dicarboxylate anaerobic carrier n=2 Tax=Coprococcus RepID=C0B9R3_9FIRM
C4-dicarboxylate anaerobic carrier {ECO:0000313|EMBL:CDB85517.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
C4-dicarboxylate anaerobic carrier family protein
L1_008_000M1_scaffold_405_2
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1160..2380)
DNA (1221bp) protein (407aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
peptidase T (EC:3.4.11.4)
Peptidase T n=2 Tax=Coprococcus RepID=C0B9R4_9FIRM
L1_008_000M1_scaffold_405_3
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2621..3322
DNA (702bp) protein (234aa)
DNA-binding helix-turn-helix protein n=2 Tax=Coprococcus RepID=C0B9R6_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDB85519.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
helix-turn-helix domain-containing protein
L1_008_000M1_scaffold_405_4
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3338..3979
DNA (642bp) protein (214aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Predicted EndoIII-related endonuclease (EC:4.2.99.18)
Endonuclease III n=2 Tax=Coprococcus RepID=C0B9R7_9FIRM
L1_008_000M1_scaffold_405_5
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3980..5116
DNA (1137bp) protein (379aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6LTV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85521.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L1_008_000M1_scaffold_405_6
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5218..6666)
DNA (1449bp) protein (483aa)
Iron only hydrogenase large subunit, C-terminal domain (EC:1.12.7.2)
4Fe-4S binding domain protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6MI14_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDB85522.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L1_008_000M1_scaffold_405_7
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6885..7769
DNA (885bp) protein (295aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6LDH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85523.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L1_008_000M1_scaffold_405_8
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7782..8159
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0B9S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG90024.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
L1_008_000M1_scaffold_405_9
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8433..10223
DNA (1791bp) protein (597aa)
Creatinase n=2 Tax=Coprococcus RepID=C0B9S3_9FIRM
Creatinase {ECO:0000313|EMBL:CDB85847.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
metallopeptidase, family M24
L1_008_000M1_scaffold_405_10
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10193..10408
DNA (216bp) protein (72aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Probable endonuclease 4 n=2 Tax=Coprococcus RepID=C0B9S4_9FIRM
putative endonuclease 4
L1_008_000M1_scaffold_405_11
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10405..11019
DNA (615bp) protein (205aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
nfo; endonuclease IV (EC:3.1.21.2)
Probable endonuclease 4 n=2 Tax=Coprococcus RepID=C0B9S4_9FIRM
L1_008_000M1_scaffold_405_12
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11212..11772)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LQJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85849.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L1_008_000M1_scaffold_405_13
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11997..12158
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=C0B9S8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG90030.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
L1_008_000M1_scaffold_405_14
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12158..12829
DNA (672bp) protein (224aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED (EC:5.4.2.6)
HAD hydrolase, family IA, variant 3 n=2 Tax=Coprococcus RepID=C0B9S9_9FIRM
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CDB85851.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L1_008_000M1_scaffold_405_15
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12789..13124)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6MIY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85852.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L1_008_000M1_scaffold_405_16
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13121..13834)
DNA (714bp) protein (238aa)
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
Pseudouridine synthase n=1 Tax=Coprococcus comes CAG:19 RepID=R6LEB6_9FIRM
Pseudouridine synthase {ECO:0000313|EMBL:CDB85853.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L1_008_000M1_scaffold_405_17
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13979..14089
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LQK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85854.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L1_008_000M1_scaffold_405_18
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


14329..15774
DNA (1446bp) protein (482aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
prolyl-tRNA synthetase, family I (EC:6.1.1.15)
Proline--tRNA ligase n=2 Tax=Coprococcus RepID=C0B9T4_9FIRM
L1_008_000M1_scaffold_405_19
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15787..17115
DNA (1329bp) protein (443aa)
cca; tRNA nucleotidyltransferase Cca (EC:2.7.7.72)
HDIG domain protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LUP5_9FIRM
HDIG domain protein {ECO:0000313|EMBL:CDB85856.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L1_008_000M1_scaffold_405_20
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17193..18188
DNA (996bp) protein (332aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6MIZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85857.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
CotS family spore coat protein
L1_008_000M1_scaffold_405_21
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18361..18636
DNA (276bp) protein (92aa)
DNA-binding protein HU n=2 Tax=Coprococcus RepID=C0B9T8_9FIRM
DNA-binding protein HU {ECO:0000313|EMBL:CDB85858.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Bacterial nucleoid DNA-binding protein
L1_008_000M1_scaffold_405_22
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18715..18954
DNA (240bp) protein (80aa)
S4 RNA-binding domain protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LQK4_9FIRM
S4 RNA-binding domain protein {ECO:0000313|EMBL:CDB85859.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
L1_008_000M1_scaffold_405_23
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19076..19366
DNA (291bp) protein (97aa)
Sporulation protein YabP n=2 Tax=Coprococcus RepID=C0B9U0_9FIRM
Sporulation protein YabP {ECO:0000313|EMBL:CDB85860.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
sporulation protein YabP
L1_008_000M1_scaffold_405_24
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19378..19722
DNA (345bp) protein (115aa)
Spore cortex protein YabQ (Spore_YabQ) n=2 Tax=Coprococcus RepID=C0B9U1_9FIRM
Spore cortex protein YabQ (Spore_YabQ) {ECO:0000313|EMBL:CDB85861.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Spore cortex protein YabQ (Spore_YabQ).
L1_008_000M1_scaffold_405_25
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19807..20130
DNA (324bp) protein (108aa)
Septum formation initiator n=2 Tax=Coprococcus RepID=C0B9U2_9FIRM
Septum formation initiator {ECO:0000313|EMBL:CDB85862.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Septum formation initiator.
L1_008_000M1_scaffold_405_26
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20203..21621
DNA (1419bp) protein (473aa)
Stage II sporulation protein E (SpoIIE). (EC:3.1.3.16)
Stage II sporulation protein E n=1 Tax=Coprococcus comes CAG:19 RepID=R6LEC7_9FIRM
Stage II sporulation protein E {ECO:0000313|EMBL:CDB85863.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L1_008_000M1_scaffold_405_27
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21641..23089
DNA (1449bp) protein (483aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Coprococcus comes CAG:19 RepID=R6LQK9_9FIRM
L1_008_000M1_scaffold_405_28
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23034..23555
DNA (522bp) protein (174aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Coprococcus comes CAG:19 RepID=R6LJ21_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CDB85865.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L1_008_000M1_scaffold_405_29
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23575..25392
DNA (1818bp) protein (606aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Coprococcus RepID=R6LUQ6_9FIRM
ATP-dependent metalloprotease FtsH
L1_008_000M1_scaffold_405_30
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25403..27445
DNA (2043bp) protein (681aa)
Glycosidases (EC:3.2.1.20)
Alpha amylase, catalytic domain protein n=2 Tax=Coprococcus RepID=C0B9U8_9FIRM
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EEG90050.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Displaying items 1-30 of 67 in total

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