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L1_008_000M1_scaffold_407

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_407_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

191..784
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Clostridium difficile T15 RepID=U3XAZ6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL23636.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
hypothetical protein
L1_008_000M1_scaffold_407_2
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1168..1848)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZJH9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ13925.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
N-6 DNA methylase
L1_008_000M1_scaffold_407_3
Paenibacillus durus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1913..2461)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Vibrio cholerae NCTC 8457 RepID=A3GKY6_VIBCL
Uncharacterized protein {ECO:0000313|EMBL:AKG34881.1}; TaxID=1333534 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus durus ATCC 35681.;"
hypothetical protein
L1_008_000M1_scaffold_407_4
RIFOXYD1_FULL_Proteobacteria_56_27_curated, Proteobacteria, Bacteria

Not on your lists

comp(2636..4264)
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5VR54_9FIRM
Tax=RIFOXYD1_FULL_Proteobacteria_56_27_curated
L1_008_000M1_scaffold_407_5
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4417..4773)
DNA (357bp) protein (119aa)
Toxin-antitoxin system antitoxin component Xre family n=1 Tax=Clostridium sp. CAG:91 RepID=R6W1X9_9CLOT
Toxin-antitoxin system antitoxin component Xre family {ECO:0000313|EMBL:CDD03430.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Helix-turn-helix.
L1_008_000M1_scaffold_407_6
unknown

Not on your lists

comp(4870..5490)
DNA (621bp) protein (207aa)

This feature has no annotations

L1_008_000M1_scaffold_407_7
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(6001..7638)
DNA (1638bp) protein (546aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ENJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98391.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L1_008_000M1_scaffold_407_8
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7662..9119)
DNA (1458bp) protein (486aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KAB4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS43390.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
L1_008_000M1_scaffold_407_9
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9155..10351)
DNA (1197bp) protein (399aa)
Nucleoside-diphosphate-sugar epimerases n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K298_9FIRM
Capsular biosynthesis protein {ECO:0000313|EMBL:KJF40266.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Nucleoside-diphosphate-sugar epimerases
L1_008_000M1_scaffold_407_10
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10355..11524)
DNA (1170bp) protein (390aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WUM9_9FIRM
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EGX71065.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
L1_008_000M1_scaffold_407_11
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11527..12561)
DNA (1035bp) protein (345aa)
UDP-glucose 4-epimerase n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WUM6_9FIRM
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EGX71062.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
capsular polysaccharide biosynthesis protein capD
L1_008_000M1_scaffold_407_12
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12588..14144)
DNA (1557bp) protein (519aa)
Uncharacterized protein n=2 Tax=root RepID=R5HP26_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29894.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
funZ protein
L1_008_000M1_scaffold_407_13
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14287..14643
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NK78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97741.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L1_008_000M1_scaffold_407_14
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14696..15466
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B30E69
Uncharacterized protein {ECO:0000313|EMBL:ETD23066.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
transposase
L1_008_000M1_scaffold_407_15
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15874..17403)
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B59AD6
Uncharacterized protein {ECO:0000313|EMBL:CCY29392.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L1_008_000M1_scaffold_407_16
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17415..18956)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HII3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29393.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
alginate O-acetylation protein
L1_008_000M1_scaffold_407_17
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18961..19683)
DNA (723bp) protein (241aa)
carbohydrate-binding protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B36DBF
Uncharacterized protein {ECO:0000313|EMBL:EOS61192.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
short-chain dehydrogenase/reductase SDR
L1_008_000M1_scaffold_407_18
Anaerovibrio lipolyticus, Anaerovibrio, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19696..19941)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HMK0_9FIRM
Acyl carrier protein {ECO:0000313|EMBL:KHM51773.1}; TaxID=82374 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Anaerovibrio.;" source="Anaerovibrio lipolyticus.;"
Acyl carrier protein
L1_008_000M1_scaffold_407_19
Anaerovibrio lipolyticus, Anaerovibrio, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19961..20383)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NAA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KHM51774.1}; TaxID=82374 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Anaerovibrio.;" source="Anaerovibrio lipolyticus.;"
MaoC domain-containing protein dehydratase
L1_008_000M1_scaffold_407_20
Anaerovibrio lipolyticus, Anaerovibrio, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20380..21297)
DNA (918bp) protein (306aa)
1-deoxy-d-xylulose-5-phosphate synthase (EC:2.2.1.7)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NB74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KHM51775.1}; TaxID=82374 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Anaerovibrio.;" source="Anaerovibrio lipolyticus.;"
L1_008_000M1_scaffold_407_21
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21297..22127)
DNA (831bp) protein (277aa)
transketolase (EC:2.2.1.1)
Transketolase N-terminal subunit n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HXA9_9FIRM
Transketolase N-terminal subunit {ECO:0000313|EMBL:CCY29397.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
L1_008_000M1_scaffold_407_22
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22203..23174)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2A5F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ23431.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
L1_008_000M1_scaffold_407_23
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23171..24964)
DNA (1794bp) protein (598aa)
FkbH domain-containing protein n=1 Tax=Dorea sp. 5-2 RepID=R9NA76_9FIRM
FkbH domain-containing protein {ECO:0000313|EMBL:EOS80219.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
HAD-superfamily phosphatase, subfamily IIIC/FkbH-like domain
L1_008_000M1_scaffold_407_24
Firmicutes bacterium CAG:194, Firmicutes, Bacteria

Not on your lists

comp(25041..26279)
DNA (1239bp) protein (413aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase n=2 Tax=Firmicutes RepID=R5DJ48_9FIRM
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:CCZ29026.1}; TaxID=1263008 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:194.;"
L1_008_000M1_scaffold_407_25
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26324..27784)
DNA (1461bp) protein (487aa)
Polysaccharide biosynthesis protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5U6Y0_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CCZ64802.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
polysaccharide biosynthesis protein
L1_008_000M1_scaffold_407_26
Bacillus sp. B-jedd, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27806..29140)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Fusobacterium periodonticum ATCC 33693 RepID=D4CUC2_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:CEG29107.1}; TaxID=1476857 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B-jedd.;"
WblL protein
L1_008_000M1_scaffold_407_27
Thermoanaerobacterium xylanolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29203..30351)
DNA (1149bp) protein (383aa)
Glycosyl transferase group 1 n=1 Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BIT6_THEXL
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AEF17821.1}; TaxID=858215 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 /; LX-11).;"
L1_008_000M1_scaffold_407_28
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30364..30780)
DNA (417bp) protein (139aa)
WxcM-like protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H872_9FIRM
WxcM-like protein {ECO:0000313|EMBL:CDE35178.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
WxcM-like, C-terminal.
L1_008_000M1_scaffold_407_29
Butyrivibrio fibrisolvens, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30783..31886)
DNA (1104bp) protein (368aa)
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis n=1 Tax=Butyrivibrio fibrisolvens 16/4 RepID=D4IX20_BUTFI
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis {ECO:0000313|EMBL:CBK75313.1}; TaxID=657324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio fibrisolvens 16/4.;"
L1_008_000M1_scaffold_407_30
Firmicutes bacterium CAG:95, Firmicutes, Bacteria

Not on your lists

comp(31888..32913)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:95 RepID=R7N437_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF06858.1}; TaxID=1262988 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:95.;"
hypothetical protein
Displaying items 1-30 of 48 in total

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