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L1_008_000M1_scaffold_418

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_418_1
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(931..1068)
DNA (138bp) protein (46aa)
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DG54_CLOSC
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family {ECO:0000313|EMBL:CBK76678.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L1_008_000M1_scaffold_418_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1322..1636
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFB75383.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
hypothetical protein
L1_008_000M1_scaffold_418_3
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1615..2490
DNA (876bp) protein (292aa)
Integrase core domain protein n=1 Tax=Phascolarctobacterium succinatutens YIT 12067 RepID=E8LH34_9FIRM
Integrase core domain protein {ECO:0000313|EMBL:EFY03909.1}; TaxID=626939 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens YIT 12067.;"
transposase-like protein
L1_008_000M1_scaffold_418_4
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2980..4101
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FBF2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00959.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L1_008_000M1_scaffold_418_5
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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4105..4626
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KT74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS49416.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
hypothetical protein
L1_008_000M1_scaffold_418_6
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4854..5243
DNA (390bp) protein (130aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0G6F6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI96967.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L1_008_000M1_scaffold_418_7
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5277..5987
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FJQ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00962.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L1_008_000M1_scaffold_418_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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5997..6908
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98523.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L1_008_000M1_scaffold_418_9
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6908..8314
DNA (1407bp) protein (469aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FBF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00964.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
murein hydrolase
L1_008_000M1_scaffold_418_10
unknown

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8329..8484
DNA (156bp) protein (52aa)

This feature has no annotations

L1_008_000M1_scaffold_418_11
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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8468..11392
DNA (2925bp) protein (975aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYM6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98525.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L1_008_000M1_scaffold_418_12
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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11477..11767
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98527.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L1_008_000M1_scaffold_418_13
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11915..13111
DNA (1197bp) protein (399aa)
S1 RNA binding domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PCQ9_9FIRM
S1 RNA binding domain protein {ECO:0000313|EMBL:EDS10763.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L1_008_000M1_scaffold_418_14
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13186..13995
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ELI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE03281.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L1_008_000M1_scaffold_418_15
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14074..18138
DNA (4065bp) protein (1355aa)
Cna protein B-type domain n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EK73_9FIRM
Cna protein B-type domain {ECO:0000313|EMBL:CDE03279.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
Cna protein B-type domain.
L1_008_000M1_scaffold_418_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18245..18574
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55603.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L1_008_000M1_scaffold_418_17
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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18619..19023
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YF61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14222.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Protein of unknown function (DUF3268).
L1_008_000M1_scaffold_418_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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19041..19649
DNA (609bp) protein (203aa)
Sigma-70 region 2 n=2 Tax=Clostridium hathewayi RepID=D3ABM8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61653.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
sigG; sporulation sigma factor SigG
L1_008_000M1_scaffold_418_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19689..20378
DNA (690bp) protein (230aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GK66_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94960.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L1_008_000M1_scaffold_418_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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20382..20852
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33932.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L1_008_000M1_scaffold_418_21
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21042..22919
DNA (1878bp) protein (626aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2ATL3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI69179.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L1_008_000M1_scaffold_418_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23289..23705
DNA (417bp) protein (139aa)
Single-strand binding family protein n=2 Tax=Clostridium hathewayi RepID=D3ABN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61647.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L1_008_000M1_scaffold_418_23
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23805..24644
DNA (840bp) protein (280aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=R5F7H3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00990.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L1_008_000M1_scaffold_418_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24679..25752
DNA (1074bp) protein (358aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GK71_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94965.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L1_008_000M1_scaffold_418_25
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25799..26638
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98560.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L1_008_000M1_scaffold_418_26
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26738..27277
DNA (540bp) protein (180aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYR2_9FIRM
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:EDM98561.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
RNA polymerase sigma factor, sigma-70 family
L1_008_000M1_scaffold_418_27
unknown

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27283..27588
DNA (306bp) protein (102aa)

This feature has no annotations

L1_008_000M1_scaffold_418_28
unknown

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27585..27815
DNA (231bp) protein (77aa)

This feature has no annotations

L1_008_000M1_scaffold_418_29
unknown

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27878..28054
DNA (177bp) protein (59aa)

This feature has no annotations

L1_008_000M1_scaffold_418_30
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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28055..28279
DNA (225bp) protein (75aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R5D405_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB27389.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Displaying items 1-30 of 57 in total

View Taxonomy