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L1_008_000M1_scaffold_435

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_435_1
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(114..6455)
DNA (6342bp) protein (2114aa)
Conserved repeat protein n=1 Tax=Clostridium sp. CAG:590 RepID=R5E864_9CLOT
Conserved repeat protein {ECO:0000313|EMBL:CCX88780.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
hypothetical protein
L1_008_000M1_scaffold_435_2
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6797..6967)
DNA (171bp) protein (57aa)
4Fe-4S binding domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C863_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEC91037.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
L1_008_000M1_scaffold_435_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7039..7566)
DNA (528bp) protein (176aa)
Fructose-2,6-bisphosphatase (EC:5.4.2.1)
Fructose-2 6-bisphosphatase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QG07_9FIRM
Fructose-2 6-bisphosphatase {ECO:0000313|EMBL:CCZ25254.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_435_4
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7652..9058
DNA (1407bp) protein (469aa)
Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|PIRNR:PIRNR000485}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Glutamine phosphoribosylpyrophosphate amidotransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q949_9FIRM
L1_008_000M1_scaffold_435_5
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9150..10079
DNA (930bp) protein (310aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GL33_9FIRM
L1_008_000M1_scaffold_435_6
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10079..10501
DNA (423bp) protein (141aa)
Aspartate carbamoyltransferase regulatory chain allosteric domain protein n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GLY1_9FIRM
Aspartate carbamoyltransferase regulatory chain allosteric domain protein {ECO:0000313|EMBL:CDE28110.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
Aspartate carbamoyltransferase, regulatory subunit
L1_008_000M1_scaffold_435_7
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(10646..11008)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q3F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23340.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Predicted transcriptional regulators
L1_008_000M1_scaffold_435_8
Catenibacterium mitsuokai, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(11345..11821)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=E2NW33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF92591.1}; TaxID=451640 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium.;" source="Catenibacterium mitsuokai DSM 15897.;"
Predicted transcriptional regulators
L1_008_000M1_scaffold_435_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11875..12297)
DNA (423bp) protein (141aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LUB1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ64093.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L1_008_000M1_scaffold_435_10
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(12692..14137)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G9J7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW05291.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
cell envelope-related transcriptional attenuator
L1_008_000M1_scaffold_435_11
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14314..15366)
DNA (1053bp) protein (351aa)
SEC-C domain-containing protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VP12_9FIRM
SEC-C domain-containing protein {ECO:0000313|EMBL:EFV15426.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
CagZ protein
L1_008_000M1_scaffold_435_12
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15368..16468)
DNA (1101bp) protein (367aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VP13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV15427.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
hypothetical protein
L1_008_000M1_scaffold_435_13
unknown

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comp(16533..17132)
DNA (600bp) protein (200aa)

This feature has no annotations

L1_008_000M1_scaffold_435_14
unknown

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comp(17668..17835)
DNA (168bp) protein (56aa)

This feature has no annotations

L1_008_000M1_scaffold_435_15
unknown

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comp(17832..18206)
DNA (375bp) protein (125aa)

This feature has no annotations

L1_008_000M1_scaffold_435_16
unknown

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comp(18297..18626)
DNA (330bp) protein (110aa)

This feature has no annotations

L1_008_000M1_scaffold_435_17
unknown

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18631..18852
DNA (222bp) protein (74aa)

This feature has no annotations

L1_008_000M1_scaffold_435_18
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18904..20136)
DNA (1233bp) protein (411aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase n=1 Tax=Coprobacillus sp. D7 RepID=C3RRA4_9FIRM
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:CDE13473.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
L1_008_000M1_scaffold_435_19
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20140..21303)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RX55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF69495.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
hypothetical protein
L1_008_000M1_scaffold_435_20
Amphibacillus xylanus, Amphibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(21310..22704)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Amphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG 17667 / NBRC 15112 / Ep01) RepID=K0J4G2_AMPXN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM48132.1}; TaxID=698758 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Amphibacillus.;" source="Amphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG; 17667 / NBRC 15112 / Ep01).;"
L1_008_000M1_scaffold_435_21
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22694..23971)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RX56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF69496.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
hypothetical protein
L1_008_000M1_scaffold_435_22
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23913..24782)
DNA (870bp) protein (290aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFF69497.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFF69497.1};; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RX57_9FIRM
glycosyltransferase
L1_008_000M1_scaffold_435_23
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24779..25573)
DNA (795bp) protein (265aa)
Glycosyl transferase group 2 family n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LWF7_9FIRM
Glycosyl transferase group 2 family {ECO:0000313|EMBL:CCY77421.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
hypothetical protein
L1_008_000M1_scaffold_435_24
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25576..26346)
DNA (771bp) protein (257aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFF69500.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFF69500.1};; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RX60_9FIRM
family 2 glycosyl transferase
L1_008_000M1_scaffold_435_25
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26356..27285)
DNA (930bp) protein (310aa)
Branched-chain-amino-acid transaminase n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GDI0_EUBLK
branched-chain-amino-acid transaminase
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:ADO36785.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L1_008_000M1_scaffold_435_26
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27299..27982)
DNA (684bp) protein (228aa)
Pilin glycosylation protein PglB n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LE08_9FIRM
Pilin glycosylation protein PglB {ECO:0000313|EMBL:CCY77415.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
pilin glycosylation protein PglB
L1_008_000M1_scaffold_435_27
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27995..29206)
DNA (1212bp) protein (404aa)
Putative pyridoxal-dependent decarboxylase pyridoxal binding domain protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LIT8_9FIRM
Putative pyridoxal-dependent decarboxylase pyridoxal binding domain protein {ECO:0000313|EMBL:CCY77414.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
putative pyridoxal-dependent decarboxylase
L1_008_000M1_scaffold_435_28
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(29209..30033)
DNA (825bp) protein (275aa)
Putative carbon-carbon lyase n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GRR0_SELRL
putative carbon-carbon lyase
Putative carbon-carbon lyase {ECO:0000313|EMBL:BAL83447.1}; TaxID=927704 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 /; TAM6421).;"
L1_008_000M1_scaffold_435_29
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30136..30579)
DNA (444bp) protein (148aa)
Putative glycerol-3-phosphate cytidylyltransferase n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0M995_9FIRM
Putative glycerol-3-phosphate cytidylyltransferase {ECO:0000313|EMBL:EDR99356.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
glycerol-3-phosphate cytidylyltransferase
L1_008_000M1_scaffold_435_30
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(30623..30877)
DNA (255bp) protein (85aa)
Uncharacterized protein (Fragment) n=1 Tax=Coprobacillus sp. D7 RepID=C3RLT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31793.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
Predicted nucleoside-diphosphate sugar epimerases
Displaying items 1-30 of 54 in total

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