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L1_008_000M1_scaffold_464

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_464_1
Bifidobacterium stellenboschense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..283
DNA (282bp) protein (94aa)
Elongation factor Tu n=2 Tax=Bifidobacterium longum subsp. longum RepID=F8ARV3_BIFLN
tuf; translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=762211 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stellenboschense.;"
L1_008_000M1_scaffold_464_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

467..1222
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GUJ2_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI97909.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L1_008_000M1_scaffold_464_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1359..2177
DNA (819bp) protein (273aa)
Transcriptional regulator n=13 Tax=Bifidobacterium RepID=B3DT27_BIFLD
transcriptional regulator
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:CCK34560.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L1_008_000M1_scaffold_464_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2347..3411
DNA (1065bp) protein (355aa)
UPF0324 membrane protein BL1094 n=15 Tax=Bifidobacterium RepID=Y1094_BIFLO
hypothetical protein
Putative membrane spanning protein {ECO:0000313|EMBL:BAP83223.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L1_008_000M1_scaffold_464_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3468..3947)
DNA (480bp) protein (160aa)
Predicted membrane protein n=10 Tax=Bifidobacterium RepID=D6D9F8_BIFLN
Predicted membrane protein
GtrA-like protein {ECO:0000313|EMBL:EIJ26538.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_008_000M1_scaffold_464_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4028..4393)
DNA (366bp) protein (122aa)
Putative fluoride ion transporter CrcB 3 n=12 Tax=Bifidobacterium RepID=CRCB3_BIFLO
camphor resistance protein CrcB
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L1_008_000M1_scaffold_464_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4393..4929)
DNA (537bp) protein (179aa)
Putative fluoride ion transporter CrcB 2 n=9 Tax=Bifidobacterium longum RepID=CRCB2_BIFLO
crcB1; crcb1
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_008_000M1_scaffold_464_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5333..6376
DNA (1044bp) protein (348aa)
Tdh1 n=8 Tax=Bifidobacterium RepID=E4QZN6_BIFLM
molecular chaperone GroES
Putative alcohol dehydrogenase {ECO:0000313|EMBL:BAJ66191.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_008_000M1_scaffold_464_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6747..6938
DNA (192bp) protein (64aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=S3DKT8_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY20871.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_008_000M1_scaffold_464_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6959..8338)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=C5E7X8_BIFLI
ATPase AAA
ATPase AAA {ECO:0000313|EMBL:KEY20872.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L1_008_000M1_scaffold_464_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8602..8772)
DNA (171bp) protein (57aa)
Uncharacterized protein n=10 Tax=Bifidobacterium RepID=C5E7X7_BIFLI
MarR family transcripitonal regulator
Uncharacterized protein {ECO:0000313|EMBL:EIJ32264.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L1_008_000M1_scaffold_464_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9162..9539
DNA (378bp) protein (126aa)
MarR family protein n=6 Tax=Bifidobacterium longum RepID=I3ATM6_BIFLN
MarR family transcripitonal regulator
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ66196.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_008_000M1_scaffold_464_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9536..12124
DNA (2589bp) protein (863aa)
Excinuclease ABC subunit A-like protein n=2 Tax=Bifidobacterium longum RepID=Q8G5D1_BIFLO
Excinuclease ABC subunit A-like protein {ECO:0000313|EMBL:AAN24891.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
Excinuclease ATPase subunit
L1_008_000M1_scaffold_464_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12182..13540
DNA (1359bp) protein (453aa)
Na+-driven multidrug efflux pump n=6 Tax=Bifidobacterium longum RepID=B3DT12_BIFLD
norM3; Na+-driven multidrug efflux pump
MATE efflux family protein {ECO:0000313|EMBL:EEI81103.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_008_000M1_scaffold_464_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13557..14240
DNA (684bp) protein (228aa)
Endonuclease III {ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|PIRNR:PIRNR001435};; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
Endonuclease III n=4 Tax=Bifidobacterium longum RepID=E8MHE6_BIFL2
endonuclease III
L1_008_000M1_scaffold_464_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14414..14710)
DNA (297bp) protein (99aa)
Uncharacterized protein n=5 Tax=Bifidobacterium longum RepID=B3DT10_BIFLD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ70694.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L1_008_000M1_scaffold_464_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14732..15403
DNA (672bp) protein (224aa)
Acetyltransferase (Isoleucine patch superfamily) {ECO:0000313|EMBL:CBK70797.1}; EC=2.3.1.18 {ECO:0000313|EMBL:CBK70797.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Acetyltransferase (Isoleucine patch superfamily) n=3 Tax=Bifidobacterium longum RepID=D6D9E4_BIFLN
wbbJ2; Isoleucine patch superfamily acetyltransferase
L1_008_000M1_scaffold_464_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15413..15676)
DNA (264bp) protein (88aa)
Isoleucine patch superfamily acetyltransferase n=12 Tax=Bifidobacterium RepID=B3DT08_BIFLD
hypothetical protein
Nodulation protein L {ECO:0000313|EMBL:KEY32557.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L1_008_000M1_scaffold_464_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15841..16929
DNA (1089bp) protein (363aa)
Hypothetical permease n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DT07_BIFLD
permease
Hypothetical permease {ECO:0000313|EMBL:ACD98276.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L1_008_000M1_scaffold_464_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17016..17537
DNA (522bp) protein (174aa)
Truncated beta-glucuronidase n=2 Tax=Bifidobacterium longum RepID=E8MHF1_BIFL2
truncated beta-glucuronidase
Truncated beta-glucuronidase {ECO:0000313|EMBL:BAJ66204.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_008_000M1_scaffold_464_21
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17717..19129)
DNA (1413bp) protein (471aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Glutamine synthetase n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NFH1_9BIFI
glnA2; glutamine synthetase
L1_008_000M1_scaffold_464_22
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19449..20231)
DNA (783bp) protein (261aa)
Uncharacterized protein n=11 Tax=Bifidobacterium RepID=B3DT04_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY96080.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L1_008_000M1_scaffold_464_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20315..21805)
DNA (1491bp) protein (497aa)
Dihydrolipoamide dehydrogenase n=5 Tax=Bifidobacterium longum RepID=E8MHG5_BIFL2
dihydrolipoamide dehydrogenase
Dihydrolipoamide dehydrogenase {ECO:0000313|EMBL:AEI97888.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L1_008_000M1_scaffold_464_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21954..22577)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GUG7_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ66219.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L1_008_000M1_scaffold_464_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22669..24036
DNA (1368bp) protein (456aa)
Peptidase dimerization domain protein n=3 Tax=Bifidobacterium longum RepID=C2GUG6_BIFLN
hypothetical protein
Peptidase dimerization domain protein {ECO:0000313|EMBL:EEI81093.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L1_008_000M1_scaffold_464_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24336..24935
DNA (600bp) protein (200aa)
Uncharacterized protein n=10 Tax=Bifidobacterium RepID=Q8G5E3_BIFLO
hypothetical protein
ABC transporter permease {ECO:0000313|EMBL:AIW43520.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_008_000M1_scaffold_464_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24935..26410
DNA (1476bp) protein (492aa)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ART1_BIFLN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EIJ26516.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
cbiO3; cbio3
L1_008_000M1_scaffold_464_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26407..27234
DNA (828bp) protein (276aa)
ABC-type cobalt transport system permease component n=8 Tax=Bifidobacterium RepID=B3DSZ8_BIFLD
cbiQ2; cbiq2
Cobalt ABC transporter permease {ECO:0000313|EMBL:AIW43522.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L1_008_000M1_scaffold_464_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27430..28308
DNA (879bp) protein (293aa)
Possible rRNA methylase n=11 Tax=Bifidobacterium RepID=Q8G5E6_BIFLO
rRNA methylase
Possible rRNA methylase {ECO:0000313|EMBL:AAN24876.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L1_008_000M1_scaffold_464_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


28374..29429
DNA (1056bp) protein (352aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Phenylalanine--tRNA ligase alpha subunit n=15 Tax=Bifidobacterium RepID=SYFA_BIFLO
pheS; phes
Displaying items 1-30 of 73 in total

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