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L1_008_000M1_scaffold_469

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_469_1
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25..1068
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GLC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13376.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
Transposase and inactivated derivatives, IS30 family
L1_008_000M1_scaffold_469_2
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1736..2323
DNA (588bp) protein (196aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EZC0_9FIRM
L1_008_000M1_scaffold_469_3
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2320..3858
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EZB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG35353.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Predicted acetyltransferase involved in intracellular survival and related acetyltransferases
L1_008_000M1_scaffold_469_4
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4074..5468
DNA (1395bp) protein (465aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=2 Tax=Eubacterium RepID=C0ES68_9FIRM
L1_008_000M1_scaffold_469_5
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5453..5881
DNA (429bp) protein (143aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Mini-ribonuclease 3 n=2 Tax=Eubacterium RepID=C0ES69_9FIRM
hypothetical protein
L1_008_000M1_scaffold_469_6
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5895..6650
DNA (756bp) protein (252aa)
rRNA methylase, putative, group 3 (EC:2.1.1.-)
RNA methyltransferase, TrmH family, group 3 n=2 Tax=Eubacterium RepID=C0ES70_9FIRM
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EEG37861.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L1_008_000M1_scaffold_469_7
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6856..7620)
DNA (765bp) protein (255aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0ES78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG37870.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L1_008_000M1_scaffold_469_8
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7743..9083
DNA (1341bp) protein (447aa)
Metallo-beta-lactamase domain protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ES80_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EEG37871.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Predicted hydrolase (metallo-beta-lactamase superfamily)
L1_008_000M1_scaffold_469_9
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9234..9791
DNA (558bp) protein (186aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=2 Tax=Eubacterium RepID=C0ES81_9FIRM
L1_008_000M1_scaffold_469_10
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10300..11100
DNA (801bp) protein (267aa)
sorbitol-6-phosphate 2-dehydrogenase (EC:1.1.1.140)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Eubacterium RepID=C0ES82_9FIRM
Oxidoreductase short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CDB18392.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L1_008_000M1_scaffold_469_11
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11198..11677
DNA (480bp) protein (160aa)
Glucitol operon activator protein (GutM) n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ES83_9FIRM
Glucitol operon activator protein (GutM) {ECO:0000313|EMBL:EEG37874.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
glucitol operon activator
L1_008_000M1_scaffold_469_12
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11692..12246
DNA (555bp) protein (185aa)
PTS system, glucitol/sorbitol-specific, IIC component {ECO:0000313|EMBL:EEG37875.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EEG37875.1};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
PTS system, glucitol/sorbitol-specific, IIC component n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ES84_9FIRM
srlA; PTS system glucitol/sorbitol-specific transporter subunit IIC2
L1_008_000M1_scaffold_469_13
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12273..13283
DNA (1011bp) protein (337aa)
PTS system, glucitol/sorbitol-specific, IIBC component n=2 Tax=Eubacterium RepID=C0ES85_9FIRM
PTS system glucitol/sorbitol-specific IIBC component {ECO:0000313|EMBL:CDB18395.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
PTS system, glucitol/sorbitol-specific, IIBC subunit
L1_008_000M1_scaffold_469_14
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13610..14020
DNA (411bp) protein (137aa)
PTS system, glucitol/sorbitol-specific, IIA component {ECO:0000313|EMBL:EEG37877.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EEG37877.1};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
srlB; PTS system glucitol/sorbitol-specific transporter subunit IIA (EC:2.7.1.69)
PTS system, glucitol/sorbitol-specific, IIA component n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ES86_9FIRM
L1_008_000M1_scaffold_469_15
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14260..16164
DNA (1905bp) protein (635aa)
PRD domain protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GWE7_9FIRM
PRD domain protein {ECO:0000313|EMBL:CDB18397.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
transcriptional antiterminator, BglG
L1_008_000M1_scaffold_469_16
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16889..17725
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FYU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB18398.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L1_008_000M1_scaffold_469_17
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17947..18603
DNA (657bp) protein (219aa)
Cell Wall Hydrolase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G9X5_9FIRM
Cell Wall Hydrolase {ECO:0000313|EMBL:CDB18399.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
cell wall hydrolase SleB
L1_008_000M1_scaffold_469_18
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18788..20455
DNA (1668bp) protein (556aa)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ES90_9FIRM
L1_008_000M1_scaffold_469_19
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20642..21475
DNA (834bp) protein (278aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.8.1.-)
Ferredoxin--NADP+ reductase subunit alpha n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GAT0_9FIRM
Ferredoxin--NADP+ reductase subunit alpha {ECO:0000313|EMBL:CDB18401.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L1_008_000M1_scaffold_469_20
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21475..22872
DNA (1398bp) protein (466aa)
Glutamate synthase (NADPH), homotetrameric {ECO:0000313|EMBL:EEG37883.1}; EC=1.4.1.13 {ECO:0000313|EMBL:EEG37883.1};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
sulfide dehydrogenase (flavoprotein) subunit SudA (EC:1.4.1.13 1.97.-.- 1.4.1.14)
Glutamate synthase (NADPH), homotetrameric n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ES92_9FIRM
L1_008_000M1_scaffold_469_21
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23284..25356
DNA (2073bp) protein (691aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0ES94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG37885.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L1_008_000M1_scaffold_469_22
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25716..26210
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FYV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB18403.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L1_008_000M1_scaffold_469_23
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

26630..31303
DNA (4674bp) protein (1558aa)
lacZ; beta-galactosidase (EC:3.2.1.23)
Glycosyl hydrolase family 2 sugar binding domain protein n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BMB1_9FIRM
Glycosyl hydrolase family 2 sugar binding domain protein {ECO:0000313|EMBL:CDA64290.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
L1_008_000M1_scaffold_469_24
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31610..33061
DNA (1452bp) protein (484aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=2 Tax=Eubacterium RepID=C0F004_9FIRM
L1_008_000M1_scaffold_469_25
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33206..33970
DNA (765bp) protein (255aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G234_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDB18405.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
N-acetylmuramoyl-L-alanine amidase
L1_008_000M1_scaffold_469_26
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34111..35193
DNA (1083bp) protein (361aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=2 Tax=Eubacterium RepID=C0F006_9FIRM
L1_008_000M1_scaffold_469_27
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35326..36999
DNA (1674bp) protein (558aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=2 Tax=Eubacterium RepID=C0F007_9FIRM
L1_008_000M1_scaffold_469_28
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37020..38723
DNA (1704bp) protein (568aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FYV7_9FIRM
L1_008_000M1_scaffold_469_29
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38740..39906
DNA (1167bp) protein (389aa)
Phosphoglycerate dehydrogenase and related dehydrogenases (EC:1.1.1.95)
4-phosphoerythronate dehydrogenase n=2 Tax=Eubacterium RepID=C0F009_9FIRM
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:CDB18409.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L1_008_000M1_scaffold_469_30
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40024..41109
DNA (1086bp) protein (362aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G240_9FIRM
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:CDB18410.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Displaying items 1-30 of 38 in total

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