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L1_008_000M1_scaffold_495

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_495_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..178
DNA (177bp) protein (59aa)
Site-specific recombinase, phage integrase family n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MR84_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDR99740.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Site-specific recombinase XerD
L1_008_000M1_scaffold_495_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

141..1613
DNA (1473bp) protein (491aa)
Site-specific recombinase, phage integrase family n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MR85_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDR99741.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Site-specific recombinase XerD
L1_008_000M1_scaffold_495_3
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(1682..4153)
DNA (2472bp) protein (824aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZM54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15670.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
L1_008_000M1_scaffold_495_4
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

comp(4143..7232)
DNA (3090bp) protein (1030aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YKD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15671.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L1_008_000M1_scaffold_495_5
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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comp(7225..8355)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YJA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15672.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L1_008_000M1_scaffold_495_6
unknown

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8570..8758
DNA (189bp) protein (63aa)

This feature has no annotations

L1_008_000M1_scaffold_495_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10014..12002)
DNA (1989bp) protein (663aa)
Endoglucanase {ECO:0000256|RuleBase:RU361153, ECO:0000313|EMBL:CBL35203.1}; EC=3.2.1.4 {ECO:0000256|RuleBase:RU361153};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Endoglucanase n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MN70_9FIRM
Endoglucanase
L1_008_000M1_scaffold_495_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12024..13325)
DNA (1302bp) protein (434aa)
beta-fructofuranosidase (EC:3.2.1.26)
Glycosyl hydrolase family 32 n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MR91_9FIRM
Glycosyl hydrolase family 32 {ECO:0000313|EMBL:EDR99748.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L1_008_000M1_scaffold_495_9
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13432..14340)
DNA (909bp) protein (303aa)
Transporter small conductance mechanosensitive ion channel MscS family protein n=2 Tax=Eubacterium RepID=R6RKS6_9FIRM
Transporter small conductance mechanosensitive ion channel MscS family protein {ECO:0000313|EMBL:CDC49488.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Small-conductance mechanosensitive channel
L1_008_000M1_scaffold_495_10
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14362..15663)
DNA (1302bp) protein (434aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUW8_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBK96887.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_495_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15663..16619)
DNA (957bp) protein (319aa)
TIGR00159 family protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MR95_9FIRM
TIGR00159 family protein {ECO:0000313|EMBL:EDR99751.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
conserved hypothetical protein TIGR00159
L1_008_000M1_scaffold_495_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17002..20553
DNA (3552bp) protein (1184aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase n=3 Tax=root RepID=B0MR96_9FIRM
L1_008_000M1_scaffold_495_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20848..22191
DNA (1344bp) protein (448aa)
Amino acid carrier protein n=2 Tax=Eubacterium RepID=B0MR98_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:EDR99754.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
amino acid carrier protein
L1_008_000M1_scaffold_495_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22495..24276
DNA (1782bp) protein (594aa)
Phosphoenolpyruvate carboxykinase (GTP) (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000313|EMBL:CBK96892.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUX3_9FIRM
L1_008_000M1_scaffold_495_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24466..25377)
DNA (912bp) protein (304aa)
ABC transporter, permease protein n=2 Tax=root RepID=B0MRA0_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EDR99756.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L1_008_000M1_scaffold_495_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25383..26360)
DNA (978bp) protein (326aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUX4_9FIRM
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK96893.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_495_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26527..27978)
DNA (1452bp) protein (484aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUX5_9FIRM
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK96894.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_495_18
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28761..29258
DNA (498bp) protein (166aa)
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=4 Tax=Eubacterium RepID=D4JUX6_9FIRM
L1_008_000M1_scaffold_495_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29215..30033
DNA (819bp) protein (273aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=2 Tax=root RepID=B0MRA4_9FIRM
L1_008_000M1_scaffold_495_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30079..31503
DNA (1425bp) protein (475aa)
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485, ECO:0000313|EMBL:CBK96896.1}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|PIRNR:PIRNR000485, ECO:0000313|EMBL:CBK96896.1};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|PIRNR:PIRNR000485}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Amidophosphoribosyltransferase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUX7_9FIRM
L1_008_000M1_scaffold_495_21
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31500..32963
DNA (1464bp) protein (488aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RVS1_9FIRM
L1_008_000M1_scaffold_495_22
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32998..34035
DNA (1038bp) protein (346aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Phosphoribosylformylglycinamidine cyclo-ligase n=2 Tax=Eubacterium siraeum RepID=D4MN80_9FIRM
L1_008_000M1_scaffold_495_23
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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34037..34663
DNA (627bp) protein (209aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RP36_9FIRM
L1_008_000M1_scaffold_495_24
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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34663..35424
DNA (762bp) protein (254aa)
Probable methyltransferase n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RKM6_9FIRM
Probable methyltransferase {ECO:0000313|EMBL:CDC49448.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
methyltransferase
L1_008_000M1_scaffold_495_25
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35440..36156
DNA (717bp) protein (239aa)
IMP cyclohydrolase-like protein n=2 Tax=root RepID=D4JUY1_9FIRM
IMP cyclohydrolase-like protein.
IMP cyclohydrolase-like protein {ECO:0000313|EMBL:CBK96900.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_495_26
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36177..37355
DNA (1179bp) protein (393aa)
AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) (EC:2.1.2.3 3.5.4.10)
AICAR transformylase/IMP cyclohydrolase PurH (Only IMP cyclohydrolase domain in Aful) {ECO:0000313|EMBL:CBK96901.1}; EC=2.1.2.3 {ECO:0000313|EMBL:CBK96901.1};; EC=3.5.4.10 {ECO:0000313|EMBL:CBK96901.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
AICAR transformylase/IMP cyclohydrolase PurH (Only IMP cyclohydrolase domain in Aful) n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUY2_9FIRM
L1_008_000M1_scaffold_495_27
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37661..38209
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUY3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96902.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_495_28
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38206..38985
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MRB2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR99768.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L1_008_000M1_scaffold_495_29
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38982..39659
DNA (678bp) protein (226aa)
Uncharacterized low-complexity proteins n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUY4_9FIRM
Uncharacterized low-complexity proteins
Uncharacterized low-complexity proteins {ECO:0000313|EMBL:CBK96903.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_495_30
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39694..40974
DNA (1281bp) protein (427aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Phosphoribosylamine--glycine ligase n=2 Tax=Eubacterium RepID=D4JUY5_9FIRM
Displaying items 1-30 of 39 in total

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