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L1_008_000M1_scaffold_505

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_505_1
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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638..2089
DNA (1452bp) protein (484aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=2 Tax=Eubacterium RepID=C0EWV8_9FIRM
MiaB family RNA modification protein
L1_008_000M1_scaffold_505_2
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2082..4712
DNA (2631bp) protein (877aa)
DNA mismatch repair protein MutS n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GSW5_9FIRM
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
DNA mismatch repair protein MutS
L1_008_000M1_scaffold_505_3
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4849..7044
DNA (2196bp) protein (732aa)
DNA mismatch repair protein MutL n=2 Tax=Eubacterium RepID=C0EWW0_9FIRM
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
DNA mismatch repair protein MutL
L1_008_000M1_scaffold_505_4
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7057..8019
DNA (963bp) protein (321aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
tRNA isopentenyltransferase (miaA) (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FYR3_9FIRM
L1_008_000M1_scaffold_505_5
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8003..9322
DNA (1320bp) protein (440aa)
Aluminum resistance protein n=2 Tax=Eubacterium RepID=C0EWW2_9FIRM
Aluminum resistance protein {ECO:0000313|EMBL:CDB17214.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Cys/Met metabolism pyridoxal-phosphate-dependent enzyme
L1_008_000M1_scaffold_505_6
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9423..10121
DNA (699bp) protein (233aa)
DNA repair protein RadC n=2 Tax=Eubacterium RepID=C0EWW3_9FIRM
DNA repair protein RadC {ECO:0000313|EMBL:EEG36168.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
DNA replication and repair protein RadC
L1_008_000M1_scaffold_505_7
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10245..11285
DNA (1041bp) protein (347aa)
Cell shape determining protein, MreB/Mrl family n=2 Tax=Eubacterium RepID=C0EWW4_9FIRM
Cell shape determining protein MreB/Mrl family {ECO:0000313|EMBL:CDB17212.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
rod shape-determining protein MreB
L1_008_000M1_scaffold_505_8
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11301..12170
DNA (870bp) protein (290aa)
Cell shape-determining protein MreC n=2 Tax=Eubacterium RepID=C0EWW5_9FIRM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
rod shape-determining protein MreC
L1_008_000M1_scaffold_505_9
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12246..12761
DNA (516bp) protein (172aa)
Rod shape-determining protein MreD n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EWW6_9FIRM
Rod shape-determining protein MreD {ECO:0000313|EMBL:EEG36171.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
rod shape-determining protein MreD
L1_008_000M1_scaffold_505_10
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12754..15693
DNA (2940bp) protein (980aa)
Putative penicillin-binding protein 2 n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EWW7_9FIRM
Putative penicillin-binding protein 2 {ECO:0000313|EMBL:EEG36172.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
pbpA1; penicillin-binding protein PbpA1
L1_008_000M1_scaffold_505_11
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15761..16510
DNA (750bp) protein (250aa)
Probable septum site-determining protein MinC n=2 Tax=Eubacterium RepID=C0EWW8_9FIRM
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
septum site-determining protein MinC
L1_008_000M1_scaffold_505_12
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16532..17323
DNA (792bp) protein (264aa)
Site-determining protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EWW9_9FIRM
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
septum site-determining protein MinD
L1_008_000M1_scaffold_505_13
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17338..17613
DNA (276bp) protein (92aa)
Cell division topological specificity factor n=2 Tax=Eubacterium RepID=C0EWX0_9FIRM
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
cell division topological specificity factor
L1_008_000M1_scaffold_505_14
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17633..18757
DNA (1125bp) protein (375aa)
Cell cycle protein, FtsW/RodA/SpoVE family n=2 Tax=Eubacterium RepID=C0EWX1_9FIRM
Cell cycle protein FtsW/RodA/SpoVE family {ECO:0000313|EMBL:CDB17205.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Bacterial cell division membrane protein
L1_008_000M1_scaffold_505_15
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18770..19165
DNA (396bp) protein (132aa)
Methylglyoxal synthase {ECO:0000256|SAAS:SAAS00089917}; EC=4.2.3.3 {ECO:0000256|SAAS:SAAS00089921};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase n=2 Tax=Eubacterium RepID=C0EWX2_9FIRM
L1_008_000M1_scaffold_505_16
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19187..20152
DNA (966bp) protein (322aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FVH5_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CDB17203.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
D-alanyl-D-alanine carboxypeptidase
L1_008_000M1_scaffold_505_17
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20271..20687
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=C0EWX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17202.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
putative PilT-like ATPase
L1_008_000M1_scaffold_505_18
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20820..21767
DNA (948bp) protein (316aa)
Radical SAM protein, TIGR01212 family n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EWX5_9FIRM
Radical SAM protein, TIGR01212 family {ECO:0000313|EMBL:EEG36180.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
radical SAM protein, TIGR01212 family
L1_008_000M1_scaffold_505_19
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21769..23160
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FYP7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17200.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L1_008_000M1_scaffold_505_20
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23160..23852
DNA (693bp) protein (231aa)
Pyridoxal phosphate enzyme, YggS family n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EWX7_9FIRM
Pyridoxal phosphate enzyme, YggS family {ECO:0000313|EMBL:EEG36182.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
pyridoxal phosphate enzyme, YggS family
L1_008_000M1_scaffold_505_21
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23868..24413
DNA (546bp) protein (182aa)
Cell division protein SepF n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FVH2_9FIRM
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L1_008_000M1_scaffold_505_22
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24561..25646
DNA (1086bp) protein (362aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EWX9_9FIRM
L1_008_000M1_scaffold_505_23
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25701..26204
DNA (504bp) protein (168aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=2 Tax=Eubacterium RepID=C0EWY0_9FIRM
L1_008_000M1_scaffold_505_24
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26219..27178
DNA (960bp) protein (320aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.- 5.4.99.12)
Pseudouridine synthase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EWY1_9FIRM
L1_008_000M1_scaffold_505_25
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27308..27574
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=3 Tax=Eubacterium RepID=C0EWY2_9FIRM
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
SSU ribosomal protein S15P
L1_008_000M1_scaffold_505_26
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27637..28293
DNA (657bp) protein (219aa)
Tetratricopeptide repeat protein n=2 Tax=Eubacterium RepID=C0EWY3_9FIRM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDB17193.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L1_008_000M1_scaffold_505_27
unknown

Not on your lists

28294..28386
DNA (93bp) protein (31aa)

This feature has no annotations

L1_008_000M1_scaffold_505_28
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28530..28793
DNA (264bp) protein (88aa)
Phosphocarrier, HPr family n=2 Tax=Eubacterium RepID=C0EWY4_9FIRM
Phosphocarrier, HPr family {ECO:0000313|EMBL:EEG36189.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L1_008_000M1_scaffold_505_29
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28822..30531
DNA (1710bp) protein (570aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G786_9FIRM
L1_008_000M1_scaffold_505_30
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30773..32776
DNA (2004bp) protein (668aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
UvrD/REP helicase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EWY6_9FIRM
UvrD/REP helicase
Displaying items 1-30 of 47 in total

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