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L1_008_000M1_scaffold_507

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_507_1
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..4015
DNA (4014bp) protein (1338aa)
Amino acid adenylation domain protein n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I5I7_CLOCE
amino acid adenylation protein
Amino acid adenylation domain protein {ECO:0000313|EMBL:ACL76723.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
L1_008_000M1_scaffold_507_2
[Clostridium] cellulolyticum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4112..4936
DNA (825bp) protein (275aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) RepID=B8I2H7_CLOCE
bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:ACL75970.1}; TaxID=394503 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 /; H10).;"
L1_008_000M1_scaffold_507_3
unknown

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4917..5894
DNA (978bp) protein (326aa)

This feature has no annotations

L1_008_000M1_scaffold_507_4
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5951..6928
DNA (978bp) protein (326aa)
nodulation protein nolNO (EC:2.1.3.-)
Uncharacterized protein n=1 Tax=Clostridium papyrosolvens C7 RepID=U4QZZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EPR10577.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
L1_008_000M1_scaffold_507_5
Pseudomonas sp. Os17, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6938..8434
DNA (1497bp) protein (499aa)
MmcA n=1 Tax=Streptomyces lavendulae RepID=Q9X5R9_STRLA
Uncharacterized protein {ECO:0000313|EMBL:BAQ75401.1}; TaxID=1500686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. Os17.;"
type I phosphodiesterase/nucleotide pyrophosphatase
L1_008_000M1_scaffold_507_6

Not on your lists

8448..9248
DNA (801bp) protein (267aa)
Marine sediment metagenome DNA, contig: S03H2_L01467 {ECO:0000313|EMBL:GAH47438.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Sulfate adenylyltransferase subunit 2 id=2188932 bin=GWB2_Proteobacteria_55_19 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
Sulfate adenylyltransferase subunit 2
L1_008_000M1_scaffold_507_7
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9286..9543
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6UAD6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ55124.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L1_008_000M1_scaffold_507_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

9769..11007
DNA (1239bp) protein (413aa)
GTPase, sulfate adenylate transferase subunit 1 n=3 Tax=Clostridium acetobutylicum RepID=F0KD62_CLOAE
cysN; GTPase, sulfate adenylate transferase subunit 1
Tax=CG_Woesearch_02
L1_008_000M1_scaffold_507_9
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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11025..12302
DNA (1278bp) protein (426aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CYV9_HALOH
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:ACL70478.1}; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562).;"
L1_008_000M1_scaffold_507_10
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12289..13659
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Clostridium papyrosolvens C7 RepID=U4R1L9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EPR10570.1}; TaxID=1330534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens C7.;"
acyl-CoA synthetase
L1_008_000M1_scaffold_507_11
unknown

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13830..14549
DNA (720bp) protein (240aa)

This feature has no annotations

L1_008_000M1_scaffold_507_12
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

14565..15344
DNA (780bp) protein (260aa)
hypothetical protein n=2 Tax=Proteobacteria RepID=UPI000367F611
hypothetical protein
Tax=RBG_13_Nitrospirae_39_12_curated
L1_008_000M1_scaffold_507_13
Streptomyces lavendulae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15319..16404
DNA (1086bp) protein (362aa)
MitD n=1 Tax=Streptomyces lavendulae RepID=Q9X5R8_STRLA
MitD {ECO:0000313|EMBL:AAD32720.1}; TaxID=1914 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lavendulae.;"
putative Fe-S oxidoreductase
L1_008_000M1_scaffold_507_14
Streptomyces lavendulae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16401..17999
DNA (1599bp) protein (533aa)
MmcD n=1 Tax=Streptomyces lavendulae RepID=Q9X5S2_STRLA
MmcD {ECO:0000313|EMBL:AAD32727.1}; TaxID=1914 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lavendulae.;"
Fe-S oxidoreductase
L1_008_000M1_scaffold_507_15
Jejuia pallidilutea, Jejuia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18009..18641
DNA (633bp) protein (211aa)
scl:sce2401 carboxyl-and carbamoyltransferase (EC:2.1.3.-); K00612 carbamoyltransferase [EC:2.1.3.-] id=19703 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Carbamoyltransferase {ECO:0000313|EMBL:GAL69458.1}; TaxID=504487 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Jejuia.;" source="Jejuia pallidilutea.;"
nodulation protein nolO
L1_008_000M1_scaffold_507_16
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18755..19471
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HEJ8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEA15812.1}; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium ING2-E5B.;"
L1_008_000M1_scaffold_507_17
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19637..19840
DNA (204bp) protein (68aa)
Oxidoreductase domain protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T7B1_9CLOT
Oxidoreductase domain protein {ECO:0000313|EMBL:EGD49359.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
L1_008_000M1_scaffold_507_18
unknown

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19946..20209
DNA (264bp) protein (88aa)

This feature has no annotations

L1_008_000M1_scaffold_507_19
unknown

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20206..20409
DNA (204bp) protein (68aa)

This feature has no annotations

L1_008_000M1_scaffold_507_20
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20369..21277
DNA (909bp) protein (303aa)
ROK family protein n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TF98_9CLOT
ROK family protein {ECO:0000313|EMBL:EGD47036.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
transcriptional regulator/sugar kinase
L1_008_000M1_scaffold_507_21
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21285..21764
DNA (480bp) protein (160aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
3-dehydroquinate dehydratase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T7B2_9CLOT
3-dehydroquinate dehydratase
L1_008_000M1_scaffold_507_22
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21745..22953
DNA (1209bp) protein (403aa)
Glutamine--scyllo-inositol transaminase {ECO:0000313|EMBL:EGD46970.1}; EC=2.6.1.50 {ECO:0000313|EMBL:EGD46970.1};; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
Glutamine--scyllo-inositol transaminase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TF32_9CLOT
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
L1_008_000M1_scaffold_507_23
[Clostridium] papyrosolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22969..23595
DNA (627bp) protein (209aa)
Haloacid dehalogenase domain protein hydrolase n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1T7B3_9CLOT
Haloacid dehalogenase domain protein hydrolase {ECO:0000313|EMBL:EGD49361.1}; TaxID=588581 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] papyrosolvens DSM 2782.;"
haloacid dehalogenase superfamily protein
L1_008_000M1_scaffold_507_24
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23668..25260
DNA (1593bp) protein (531aa)
AMP-forming long-chain acyl-CoA synthetase n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IR70_DESMD
AMP-forming long-chain acyl-CoA synthetase
AMP-forming long-chain acyl-CoA synthetase {ECO:0000313|EMBL:AFQ44317.1}; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB; 13706 / S10).;"
L1_008_000M1_scaffold_507_25
unknown

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25265..25504
DNA (240bp) protein (80aa)

This feature has no annotations

L1_008_000M1_scaffold_507_26
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

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25525..25977
DNA (453bp) protein (151aa)
rfaE_1; RfaE bifunctional protein, domain II (EC:2.7.7.-)
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI00037E4CBE
Tax=RBG_13_OP8X_37_8_curated
L1_008_000M1_scaffold_507_27
Helicobacter cinaedi, Helicobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

26076..27062
DNA (987bp) protein (329aa)
ADP-heptose synthase (EC:2.7.7.-)
Bifunctional protein HldE n=3 Tax=Helicobacter cinaedi RepID=I2FA93_HELCP
Bifunctional protein HldE {ECO:0000256|HAMAP-Rule:MF_01603, ECO:0000256|SAAS:SAAS00015122}; TaxID=1206745 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter.;" source="Helicobacter cinaedi ATCC BAA-847.;"
L1_008_000M1_scaffold_507_28

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27082..27462
DNA (381bp) protein (127aa)
Probable phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; TaxID=1502289 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-B03.;"
Phosphoheptose isomerase n=2 Tax=Dialister micraerophilus RepID=E4L7H8_9FIRM
phosphoheptose isomerase
L1_008_000M1_scaffold_507_29
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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27660..28181
DNA (522bp) protein (174aa)
D,D-heptose 1,7-bisphosphate phosphatase {ECO:0000256|PIRNR:PIRNR004682}; EC=3.1.3.- {ECO:0000256|PIRNR:PIRNR004682};; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
D,D-heptose 1,7-bisphosphate phosphatase id=2769632 bin=GWF2_WWE1_40_14 species=Fusobacterium ulcerans genus=Fusobacterium taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWF2_WWE1_40_14 organism_group=WWE1
D,D-heptose 1,7-bisphosphate phosphatase
L1_008_000M1_scaffold_507_30
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28174..28347
DNA (174bp) protein (58aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHD8_9CLOT
Displaying items 1-30 of 54 in total

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