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L1_008_000M1_scaffold_519

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Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_519_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..118
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KMW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDK24134.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
L1_008_000M1_scaffold_519_2
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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468..2927
DNA (2460bp) protein (820aa)
F5/8 type C domain protein n=4 Tax=Lachnospiraceae RepID=A5KQU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83226.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
exo-alpha-galactosidase
L1_008_000M1_scaffold_519_3
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2952..3101
DNA (150bp) protein (50aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KQU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26605.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L1_008_000M1_scaffold_519_4
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3214..3654
DNA (441bp) protein (147aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QJW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19882.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L1_008_000M1_scaffold_519_5
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3772..4416
DNA (645bp) protein (215aa)
Maf-like protein maf n=5 Tax=Clostridiales RepID=A5KQU3_9FIRM
Maf-like protein HMPREF1025_02262 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
MAF protein
L1_008_000M1_scaffold_519_6
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4499..4672
DNA (174bp) protein (58aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 8_1_57FAA RepID=E5XFJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19884.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L1_008_000M1_scaffold_519_7
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4843..5508
DNA (666bp) protein (222aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5R0V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19885.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Predicted membrane protein
L1_008_000M1_scaffold_519_8
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5803..6522
DNA (720bp) protein (240aa)
Response regulator receiver domain protein n=4 Tax=Lachnospiraceae RepID=A5KQU5_9FIRM
Regulatory protein VanR {ECO:0000313|EMBL:EFV19886.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_000M1_scaffold_519_9
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6497..7795
DNA (1299bp) protein (433aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QD43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26600.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
integral membrane sensor signal transduction histidine kinase
L1_008_000M1_scaffold_519_10
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7951..9327)
DNA (1377bp) protein (459aa)
MATE efflux family protein n=5 Tax=Clostridiales RepID=A5KQU7_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EFV19888.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
putative efflux protein, MATE family
L1_008_000M1_scaffold_519_11
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9487..10035)
DNA (549bp) protein (183aa)
Sporulation initiation factor Spo0A domain protein n=5 Tax=Clostridiales RepID=A5KQU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26598.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
sporulation transcriptional activator Spo0A
L1_008_000M1_scaffold_519_12
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10246..10983
DNA (738bp) protein (246aa)
DNA-binding helix-turn-helix protein n=5 Tax=Clostridiales RepID=A5KQU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26597.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
putative Xre family DNA-binding protein
L1_008_000M1_scaffold_519_13
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11097..12527)
DNA (1431bp) protein (477aa)
Phospholipase D domain protein n=5 Tax=Clostridiales RepID=A5KQV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26596.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
L1_008_000M1_scaffold_519_14
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12782..13657
DNA (876bp) protein (292aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
aroE2; shikimate dehydrogenase AroE (EC:1.1.1.25)
Shikimate dehydrogenase n=5 Tax=Clostridiales RepID=A5KQV2_9FIRM
L1_008_000M1_scaffold_519_15
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13715..14524)
DNA (810bp) protein (270aa)
Cof-like hydrolase n=5 Tax=Clostridiales RepID=A5KQV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26594.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
HAD-superfamily hydrolase, subfamily IIB
L1_008_000M1_scaffold_519_16
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14558..15979)
DNA (1422bp) protein (474aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=5 Tax=Clostridiales RepID=A5KQV4_9FIRM
L1_008_000M1_scaffold_519_17
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16013..17065)
DNA (1053bp) protein (351aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=5 Tax=Clostridiales RepID=A5KQV5_9FIRM
L1_008_000M1_scaffold_519_18
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17215..18663)
DNA (1449bp) protein (483aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
putative nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=5 Tax=Clostridiales RepID=A5KQV6_9FIRM
L1_008_000M1_scaffold_519_19
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18807..20228)
DNA (1422bp) protein (474aa)
Iron-only hydrogenase maturation rSAM protein HydG n=5 Tax=Clostridiales RepID=A5KQV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26590.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
iron-only hydrogenase maturation protein HydG
L1_008_000M1_scaffold_519_20
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20326..21384)
DNA (1059bp) protein (353aa)
iron-only hydrogenase maturation protein HydE (EC:2.8.1.6)
Iron-only hydrogenase maturation rSAM protein HydE n=4 Tax=Lachnospiraceae RepID=A5KQV8_9FIRM
Radical SAM protein {ECO:0000313|EMBL:EFV19898.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L1_008_000M1_scaffold_519_21
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21524..21772)
DNA (249bp) protein (83aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QDF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26588.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
iron-only hydrogenase system regulator
L1_008_000M1_scaffold_519_22
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22235..22507
DNA (273bp) protein (91aa)
Acylphosphatases (EC:3.6.1.7)
Acylphosphatase n=5 Tax=Clostridiales RepID=A5KQW0_9FIRM
Acylphosphatase {ECO:0000313|EMBL:CCZ26587.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L1_008_000M1_scaffold_519_23
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22615..23409
DNA (795bp) protein (265aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=5 Tax=Clostridiales RepID=A5KQW1_9FIRM
L1_008_000M1_scaffold_519_24
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23530..24444
DNA (915bp) protein (305aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase n=5 Tax=Clostridiales RepID=A5KQW2_9FIRM
L1_008_000M1_scaffold_519_25
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24569..25306)
DNA (738bp) protein (246aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=3 Tax=Clostridiales RepID=E5XFL2_9FIRM
L1_008_000M1_scaffold_519_26
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25464..25925
DNA (462bp) protein (154aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=A5KR37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG83203.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
hypothetical protein
L1_008_000M1_scaffold_519_27
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25937..27493
DNA (1557bp) protein (519aa)
Putative uncharacterized protein n=3 Tax=unclassified Lachnospiraceae RepID=E5XFL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19905.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
LysM domain.
L1_008_000M1_scaffold_519_28
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27563..28438
DNA (876bp) protein (292aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=5 Tax=Clostridiales RepID=A5KR39_9FIRM
L1_008_000M1_scaffold_519_29
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28440..29123
DNA (684bp) protein (228aa)
FCD domain protein n=5 Tax=Clostridiales RepID=A5KR40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26580.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
transcriptional regulator, GntR family
L1_008_000M1_scaffold_519_30
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29196..29921
DNA (726bp) protein (242aa)
Stage II sporulation protein R n=5 Tax=Clostridiales RepID=A5KR42_9FIRM
Stage II sporulation protein R {ECO:0000313|EMBL:EDK23095.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
stage II sporulation protein R
Displaying items 1-30 of 43 in total

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