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L1_008_000M1_scaffold_537

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_537_1
unknown

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comp(1..90)
DNA (90bp) protein (30aa)

This feature has no annotations

L1_008_000M1_scaffold_537_2
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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281..2239
DNA (1959bp) protein (653aa)
Spore coat protein CotH n=2 Tax=Clostridium thermocellum RepID=A3DBZ9_CLOTH
Membrane protein {ECO:0000313|EMBL:GAE88004.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] straminisolvens JCM 21531.;"
dockerin type I cellulosome protein
L1_008_000M1_scaffold_537_3
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2474..2848)
DNA (375bp) protein (125aa)
Mn-dependent transcriptional regulator n=1 Tax=Eubacterium sp. CAG:581 RepID=R7NRG6_9FIRM
Mn-dependent transcriptional regulator {ECO:0000313|EMBL:CDF14712.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:581.;"
DtxR family iron (metal) dependent repressor
L1_008_000M1_scaffold_537_4
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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3078..3290
DNA (213bp) protein (71aa)
FeoA domain protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HS34_9FIRM
FeoA domain protein {ECO:0000313|EMBL:CCY27637.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
FeoA domain.
L1_008_000M1_scaffold_537_5
[Eubacterium] dolichum, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3415..5415
DNA (2001bp) protein (667aa)
iron transporter FeoB n=1 Tax=Allobaculum stercoricanis RepID=UPI000367D82B
Ferrous iron transport protein B {ECO:0000313|EMBL:EDP11025.1}; TaxID=428127 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="[Eubacterium] dolichum DSM 3991.;"
ferrous iron transporter FeoB
L1_008_000M1_scaffold_537_6
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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5418..5594
DNA (177bp) protein (59aa)
Heavy metal-associated domain protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HD59_9FIRM
Heavy metal-associated domain protein {ECO:0000313|EMBL:CCY27640.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_537_7
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5730..5885)
DNA (156bp) protein (52aa)
Rubredoxin n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3B2V6_9FIRM
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
rubredoxin-NAD+ reductase
L1_008_000M1_scaffold_537_8
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(5913..7751)
DNA (1839bp) protein (613aa)
Beta-lactamase domain-containing protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LL64_9FIRM
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:CDB88183.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Uncharacterized flavoproteins
L1_008_000M1_scaffold_537_9
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7756..8283)
DNA (528bp) protein (176aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QXZ1_9CLOT
L1_008_000M1_scaffold_537_10
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8290..10452)
DNA (2163bp) protein (721aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Clostridium sp. CAG:352 RepID=R6RCF9_9CLOT
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CDC40606.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L1_008_000M1_scaffold_537_11
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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10589..11245
DNA (657bp) protein (219aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CW64_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:CCX70794.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L1_008_000M1_scaffold_537_12
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11331..11822)
DNA (492bp) protein (164aa)
Putative flavin-nucleotide-binding protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FXS6_9CLOT
Putative flavin-nucleotide-binding protein {ECO:0000313|EMBL:EMS73914.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
nimA; 5-nitroimidazole resistance protein NimA
L1_008_000M1_scaffold_537_13
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12098..12733)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9K2Z3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40800.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
L1_008_000M1_scaffold_537_14
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12790..13560)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KC30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS43863.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
FR47-like protein.
L1_008_000M1_scaffold_537_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14014..14403)
DNA (390bp) protein (130aa)
Resolvase, N-terminal domain protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7K1_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EEU96144.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Site-specific recombinases, DNA invertase Pin homologs
L1_008_000M1_scaffold_537_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14438..14872)
DNA (435bp) protein (145aa)
Resolvase, N-terminal domain protein n=1 Tax=Erysipelotrichaceae bacterium 3_1_53 RepID=E2SQ69_9FIRM
Site-specific recombinases, DNA invertase Pin homologs
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EFC99382.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L1_008_000M1_scaffold_537_17
unknown

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comp(15002..15199)
DNA (198bp) protein (66aa)

This feature has no annotations

L1_008_000M1_scaffold_537_18
unknown

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comp(15171..15644)
DNA (474bp) protein (158aa)

This feature has no annotations

L1_008_000M1_scaffold_537_19
unknown

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comp(15620..15811)
DNA (192bp) protein (64aa)

This feature has no annotations

L1_008_000M1_scaffold_537_20
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16398..17951)
DNA (1554bp) protein (518aa)
FkbH like protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FTE2_9FIRM
FkbH like protein {ECO:0000313|EMBL:CDE17911.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
FkbH domain protein
L1_008_000M1_scaffold_537_21
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17956..18207)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FW25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17912.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
phosphopantetheine-containing protein
L1_008_000M1_scaffold_537_22
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18213..19109)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FTR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17913.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
L1_008_000M1_scaffold_537_23
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19121..20902)
DNA (1782bp) protein (594aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0P883_9CLOT
ABC transporter family protein
ABC transporter family protein {ECO:0000313|EMBL:AIY82842.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L1_008_000M1_scaffold_537_24
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20899..22695)
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PEG8_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEZ86037.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
ABC transporter family protein
L1_008_000M1_scaffold_537_25
unknown

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comp(22875..23027)
DNA (153bp) protein (51aa)

This feature has no annotations

L1_008_000M1_scaffold_537_26
unknown

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comp(23220..24293)
DNA (1074bp) protein (358aa)

This feature has no annotations

L1_008_000M1_scaffold_537_27
unknown

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comp(24259..25410)
DNA (1152bp) protein (384aa)

This feature has no annotations

L1_008_000M1_scaffold_537_28
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(25422..26831)
DNA (1410bp) protein (470aa)
Radical SAM additional 4Fe4S-binding domain-containing protein n=2 Tax=Treponema denticola RepID=M2BJH7_TREDN
Radical SAM additional 4Fe4S-binding domain-containing protein {ECO:0000313|EMBL:EMB29283.1}; TaxID=999431 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema denticola H1-T.;"
Fe-S oxidoreductase
L1_008_000M1_scaffold_537_29
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27548..28093)
DNA (546bp) protein (182aa)
Resolvase, N-terminal domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NFX7_CLOSV
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDS06521.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
putative site-specific recombinase
L1_008_000M1_scaffold_537_30
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28471..29760)
DNA (1290bp) protein (430aa)
DNA polymerase beta domain-containing protein region n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RNA2_9FIRM
DNA polymerase beta domain-containing protein region {ECO:0000313|EMBL:CDC49180.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
N-acetyltransferase GCN5
Displaying items 1-30 of 53 in total

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