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L1_008_000M1_scaffold_542

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_542_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(144..311)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FWT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG92895.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L1_008_000M1_scaffold_542_2
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(308..517)
DNA (210bp) protein (70aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RY00_9FIRM
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EFF69232.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
ATPases involved in chromosome partitioning
L1_008_000M1_scaffold_542_3
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(532..1398)
DNA (867bp) protein (289aa)
ParB-like protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y3T0_9FIRM
ParB-like protein {ECO:0000313|EMBL:ESL02366.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
ParB-like partition proteins
L1_008_000M1_scaffold_542_4
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(2158..3066)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F6W6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97742.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L1_008_000M1_scaffold_542_5
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(3141..4427)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ELR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97741.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
seryl-tRNA synthetase
L1_008_000M1_scaffold_542_6
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(4464..5516)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F6W1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97737.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
two-component system response regulator
L1_008_000M1_scaffold_542_7
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(5532..6053)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ELR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97736.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L1_008_000M1_scaffold_542_8
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(6093..6989)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ECZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97735.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ParB-like partition proteins
L1_008_000M1_scaffold_542_9
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(7011..7772)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EK59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97734.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ParA, ParA family ATPase
L1_008_000M1_scaffold_542_10
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(7802..8053)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EB18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97733.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L1_008_000M1_scaffold_542_11
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

8506..8991
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F6V7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97732.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
YbaK/proline--tRNA ligase associated domain-containing protein
L1_008_000M1_scaffold_542_12
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(8978..9622)
DNA (645bp) protein (215aa)
Two-component response regulator (Extracellular proteinase response regulator) n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ELR0_9FIRM
Two-component response regulator (Extracellular proteinase response regulator) {ECO:0000313|EMBL:CDA97731.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
two-component response regulator
L1_008_000M1_scaffold_542_13
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(9677..10384)
DNA (708bp) protein (236aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Histidine kinase n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ECY9_9FIRM
histidine kinase
L1_008_000M1_scaffold_542_14
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(10523..11248)
DNA (726bp) protein (242aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EK54_9FIRM
L1_008_000M1_scaffold_542_15
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(11269..13170)
DNA (1902bp) protein (634aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EB14_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
L1_008_000M1_scaffold_542_16
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(13192..14616)
DNA (1425bp) protein (475aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
tRNA modification GTPase MnmE n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F6V3_9FIRM
tRNA modification GTPase trmE
L1_008_000M1_scaffold_542_17
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14635..16329)
DNA (1695bp) protein (565aa)
Sulfatase n=2 Tax=root RepID=R6VZW0_9CLOT
Sulfatase {ECO:0000313|EMBL:CDD00009.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
sulfatase
L1_008_000M1_scaffold_542_18
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16456..17082)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:91 RepID=R6VSP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD00010.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
Predicted RNA-binding protein
L1_008_000M1_scaffold_542_19
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(17117..18415)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ECY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97725.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
membrane insertion protein
L1_008_000M1_scaffold_542_20
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18449..18679)
DNA (231bp) protein (77aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LY74_9FIRM
conserved hypothetical protein TIGR00278
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L1_008_000M1_scaffold_542_21
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(18672..19025)
DNA (354bp) protein (118aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
ribonuclease P protein component (EC:3.1.26.5)
Ribonuclease P protein component n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EB10_9FIRM
L1_008_000M1_scaffold_542_22
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19078..19212)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=2 Tax=Firmicutes RepID=R6F6U8_9FIRM
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
LSU ribosomal protein L34P
L1_008_000M1_scaffold_542_23
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

19766..21130
DNA (1365bp) protein (455aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ELQ3_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
dnaA1; chromosome replication initiator DnaA
L1_008_000M1_scaffold_542_24
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

21410..22519
DNA (1110bp) protein (370aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EK44_9FIRM
L1_008_000M1_scaffold_542_25
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

22536..22742
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6EB04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97718.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L1_008_000M1_scaffold_542_26
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

22753..23904
DNA (1152bp) protein (384aa)
DNA replication and repair protein RecF n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F6U4_9FIRM
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
recF; DNA replication and repair protein RecF
L1_008_000M1_scaffold_542_27
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23923..26130
DNA (2208bp) protein (736aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
gyrB; DNA gyrase subunit B GyrB (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Clostridium sp. CAG:510 RepID=R6C6R9_9CLOT
L1_008_000M1_scaffold_542_28
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists


26213..28813
DNA (2601bp) protein (867aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=3 Tax=root RepID=R6ELP4_9FIRM
L1_008_000M1_scaffold_542_29
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

28844..30022
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ECW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97705.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
sodium/hydrogen exchanger
L1_008_000M1_scaffold_542_30
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

30025..30774
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EK30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97704.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
Displaying items 1-30 of 44 in total

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