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L1_008_000M1_scaffold_543

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_543_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(123..860)
DNA (738bp) protein (246aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=B0MLR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS01411.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Predicted membrane protein
L1_008_000M1_scaffold_543_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1157..2071)
DNA (915bp) protein (305aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVH2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97091.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_543_3
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2311..4173
DNA (1863bp) protein (621aa)
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000313|EMBL:CBK97092.1};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=2 Tax=root RepID=D4JVH3_9FIRM
L1_008_000M1_scaffold_543_4
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4195..5283
DNA (1089bp) protein (363aa)
Methyltransferase FkbM family n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RQS3_9FIRM
Methyltransferase FkbM family {ECO:0000313|EMBL:CDC47699.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
methyltransferase, FkbM family
L1_008_000M1_scaffold_543_5
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5306..6022
DNA (717bp) protein (239aa)
Uncharacterized protein n=3 Tax=root RepID=R6RFN7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC47698.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L1_008_000M1_scaffold_543_6
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6196..7509
DNA (1314bp) protein (438aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:EDS01406.1}; EC=2.6.1.- {ECO:0000313|EMBL:EDS01406.1};; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Transcriptional regulator n=2 Tax=Eubacterium siraeum RepID=D4MI57_9FIRM
transcriptional regulator
L1_008_000M1_scaffold_543_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8235..8579
DNA (345bp) protein (115aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=B0MLQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS01405.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L1_008_000M1_scaffold_543_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8698..9030
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MI58_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL33441.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L1_008_000M1_scaffold_543_9
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9090..10793)
DNA (1704bp) protein (568aa)
Sulfate permease and related transporters (MFS superfamily) n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RXB5_9FIRM
Sulfate permease and related transporters (MFS superfamily) {ECO:0000313|EMBL:CDC47686.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Sulfate permease and related transporters (MFS superfamily)
L1_008_000M1_scaffold_543_10
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10926..11018)
DNA (93bp) protein (31aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MI60_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL33443.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L1_008_000M1_scaffold_543_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11028..11486)
DNA (459bp) protein (153aa)
Acetyltransferase, GNAT family n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLQ3_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDS01402.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
N-acetyltransferase GCN5
L1_008_000M1_scaffold_543_12
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11483..11974)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JPQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS33132.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L1_008_000M1_scaffold_543_13
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12267..12641
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS01400.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L1_008_000M1_scaffold_543_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13074..13718)
DNA (645bp) protein (215aa)
Phosphatidylglycerophosphate synthase (EC:2.7.8.5)
Phosphatidylglycerophosphate synthase {ECO:0000313|EMBL:CBK97145.1}; EC=2.7.8.5 {ECO:0000313|EMBL:CBK97145.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Phosphatidylglycerophosphate synthase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVM6_9FIRM
L1_008_000M1_scaffold_543_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13920..14243)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVM7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97146.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_543_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14267..14716)
DNA (450bp) protein (150aa)
RNase HI (EC:3.1.26.4)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
Ribonuclease H n=5 Tax=root RepID=D4JVM8_9FIRM
L1_008_000M1_scaffold_543_17
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14709..17192)
DNA (2484bp) protein (828aa)
ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVM9_9FIRM
ATPase, P-type (Transporting), HAD superfamily, subfamily IC {ECO:0000313|EMBL:CBK97148.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC
L1_008_000M1_scaffold_543_18
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17225..18541)
DNA (1317bp) protein (439aa)
ABC transporter, solute-binding protein n=2 Tax=Eubacterium RepID=B0MLP6_9FIRM
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDS01395.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Maltose-binding periplasmic proteins/domains
L1_008_000M1_scaffold_543_19
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18703..20436
DNA (1734bp) protein (578aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=2 Tax=root RepID=B0MLP5_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EDS01394.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
D-alanyl-D-alanine carboxypeptidase domain containing protein
L1_008_000M1_scaffold_543_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20503..21078)
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=3 Tax=root RepID=D4JVN1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97150.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_543_21
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21095..21853)
DNA (759bp) protein (253aa)
ABC-type polysaccharide/polyol phosphate transport system, ATPase component n=3 Tax=root RepID=D4JVN2_9FIRM
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
ABC-type polysaccharide/polyol phosphate transport system, ATPase component {ECO:0000313|EMBL:CBK97151.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_543_22
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21866..23185)
DNA (1320bp) protein (440aa)
ABC-2 type transporter n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLP2_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L1_008_000M1_scaffold_543_23
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23346..24176)
DNA (831bp) protein (277aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVN3_9FIRM
Glycosyltransferases involved in cell wall biogenesis
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CBK97152.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_543_24
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24128..25474)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS01389.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L1_008_000M1_scaffold_543_25
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25461..26639)
DNA (1179bp) protein (393aa)
Glycosyltransferase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVN4_9FIRM
Glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:CBK97153.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_543_26
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26823..27956)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MLP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS01393.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L1_008_000M1_scaffold_543_27
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28338..29051)
DNA (714bp) protein (238aa)
Pyruvate-formate lyase-activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053, ECO:0000313|EMBL:CBK97154.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Pyruvate-formate lyase-activating enzyme n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVN5_9FIRM
L1_008_000M1_scaffold_543_28
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29053..31311)
DNA (2259bp) protein (753aa)
Formate acetyltransferase 1 {ECO:0000313|EMBL:CBK97155.1}; EC=2.3.1.54 {ECO:0000313|EMBL:CBK97155.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
formate acetyltransferase 1 (EC:2.3.1.54)
Formate acetyltransferase 1 n=3 Tax=root RepID=D4JVN6_9FIRM
L1_008_000M1_scaffold_543_29
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31673..32101)
DNA (429bp) protein (143aa)
ACT domain-containing protein n=4 Tax=root RepID=D4JVN7_9FIRM
ACT domain-containing protein
ACT domain-containing protein {ECO:0000313|EMBL:CBL33456.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L1_008_000M1_scaffold_543_30
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32119..33441)
DNA (1323bp) protein (441aa)
phenylacetate-CoA ligase (EC:6.2.1.30)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444, ECO:0000313|EMBL:CBK97157.1};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Phenylacetate-CoA ligase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JVN8_9FIRM
Displaying items 1-30 of 40 in total

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