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L1_008_000M1_scaffold_554

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_554_1
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1..3402
DNA (3402bp) protein (1134aa)
Cna protein B-type domain n=2 Tax=Bacteria RepID=D6E9A0_9ACTN
Cna protein B-type domain {ECO:0000313|EMBL:CBL04297.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
Cna protein B-type domain.
L1_008_000M1_scaffold_554_2
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3399..3677
DNA (279bp) protein (93aa)
Iron dependent repressor, N-terminal DNA binding domain n=3 Tax=Bacteria RepID=D6E999_9ACTN
Iron dependent repressor, N-terminal DNA binding domain.
Iron dependent repressor, N-terminal DNA binding domain {ECO:0000313|EMBL:CBL04296.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L1_008_000M1_scaffold_554_3
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3681..5582
DNA (1902bp) protein (634aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=T4C2J8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CBL04295.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
hypothetical protein
L1_008_000M1_scaffold_554_4
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5582..7471
DNA (1890bp) protein (630aa)
Type IV secretory pathway, VirD4 components n=2 Tax=Bacteria RepID=D6E997_9ACTN
Type IV secretory pathway, VirD4 components {ECO:0000313|EMBL:CBL04294.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
Type IV secretory pathway, VirD4 components
L1_008_000M1_scaffold_554_5
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7580..7927
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=2 Tax=Bacteria RepID=D6E996_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL04293.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L1_008_000M1_scaffold_554_6
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

7935..8375
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=T4C685_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL04292.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L1_008_000M1_scaffold_554_7
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8323..10929
DNA (2607bp) protein (869aa)
AAA-like domain protein n=2 Tax=Bacteria RepID=T4C5H5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KGI76009.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_554_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10933..12846
DNA (1914bp) protein (638aa)
Lysozyme-like family protein (Fragment) n=1 Tax=Clostridium difficile F501 RepID=T4C220_CLODI
Lysozyme-like family protein {ECO:0000313|EMBL:EQI15490.1}; Flags: Fragment;; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
Collagen triple helix repeat
L1_008_000M1_scaffold_554_9
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12852..13436
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Clostridium difficile F501 RepID=T4C2K2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KGI76016.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
L1_008_000M1_scaffold_554_10
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13433..14557
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. 1_3_56FAA RepID=E5XCT9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI76015.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_554_11
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14559..15068
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=2 Tax=Bacteria RepID=D6E992_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL04289.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L1_008_000M1_scaffold_554_12
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15082..15501
DNA (420bp) protein (140aa)
TM2 domain protein n=1 Tax=Clostridium difficile F501 RepID=T4BZL1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KGI76013.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_554_13
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16313..16693
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=T4C202_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL04288.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L1_008_000M1_scaffold_554_14
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16744..22347
DNA (5604bp) protein (1868aa)
Helicase conserved C-terminal domain protein n=1 Tax=Clostridium difficile F501 RepID=T4BZK1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KGI76012.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_554_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22344..23063
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Clostridium difficile F501 RepID=T4C1Z2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQI15465.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L1_008_000M1_scaffold_554_16
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23060..23980
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. 1_3_56FAA RepID=E5XCT4_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL04319.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L1_008_000M1_scaffold_554_17
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23977..24285
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Clostridium difficile F501 RepID=T4BZJ1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KGI75978.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_554_18
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24282..24608
DNA (327bp) protein (109aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=T4C5I6_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL04317.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L1_008_000M1_scaffold_554_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25361..26590
DNA (1230bp) protein (410aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=T4C2I7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQI15456.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
hypothetical protein
L1_008_000M1_scaffold_554_20
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27110..27460)
DNA (351bp) protein (117aa)
Predicted transcriptional regulator n=3 Tax=Bacteria RepID=D6E9B7_9ACTN
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBL04314.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L1_008_000M1_scaffold_554_21
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27598..27819
DNA (222bp) protein (74aa)
Helix-turn-helix n=3 Tax=Bacteria RepID=D6E9B6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75983.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
Helix-turn-helix.
L1_008_000M1_scaffold_554_22
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(27816..28094)
DNA (279bp) protein (93aa)
Uncharacterized protein n=3 Tax=Bacteria RepID=T4C690_CLODI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL04312.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L1_008_000M1_scaffold_554_23
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28106..29383)
DNA (1278bp) protein (426aa)
Nucleotidyltransferase/DNA polymerase involved in DNA repair (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113, ECO:0000313|EMBL:CBL04311.1};; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
DNA polymerase IV n=2 Tax=Bacteria RepID=D6E9B4_9ACTN
L1_008_000M1_scaffold_554_24
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(29731..29931)
DNA (201bp) protein (67aa)
Chaperonin n=3 Tax=Bacteria RepID=E5XCS7_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL04310.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L1_008_000M1_scaffold_554_25
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30195..30518)
DNA (324bp) protein (108aa)
Putative uncharacterized protein n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E9B2_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL04309.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L1_008_000M1_scaffold_554_26
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30580..31026)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=1 Tax=Eggerthella sp. 1_3_56FAA RepID=E5XCS5_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL04308.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L1_008_000M1_scaffold_554_27
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31192..31506)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E9B0_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL04307.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L1_008_000M1_scaffold_554_28
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31632..31835
DNA (204bp) protein (68aa)
Phd_YefM n=3 Tax=Bacteria RepID=D6E9A9_9ACTN
Phd_YefM.
Phd_YefM {ECO:0000313|EMBL:CBL04306.1}; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
L1_008_000M1_scaffold_554_29
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31819..32343
DNA (525bp) protein (175aa)
Uncharacterized protein n=2 Tax=Bacteria RepID=T4C1Y7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KGI75991.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
L1_008_000M1_scaffold_554_30
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32304..32780
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium difficile F501 RepID=T4BZL5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:KGI75992.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
Displaying items 1-30 of 41 in total

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