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L1_008_000M1_scaffold_564

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_564_1
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9..668)
DNA (660bp) protein (220aa)
Uncharacterized protein n=4 Tax=Lachnospiraceae RepID=A5KPV1_9FIRM
Membrane protein {ECO:0000313|EMBL:EFV19742.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L1_008_000M1_scaffold_564_2
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(779..1981)
DNA (1203bp) protein (401aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=3 Tax=Lachnospiraceae RepID=A5KPV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19741.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L1_008_000M1_scaffold_564_3
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2119..2745)
DNA (627bp) protein (209aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KPU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25997.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
formate/nitrite transporter
L1_008_000M1_scaffold_564_4
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3307..3399
DNA (93bp) protein (31aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R5QBP3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85428.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
L1_008_000M1_scaffold_564_5
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3627..4658)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KPU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ25999.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L1_008_000M1_scaffold_564_6
Lachnospiraceae bacterium 3_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4655..5215)
DNA (561bp) protein (187aa)
RNA polymerase sigma factor n=5 Tax=Clostridiales RepID=E5XG73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG85430.1}; TaxID=665950 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_46FAA.;"
RNA polymerase sigma factor, sigma-70 family
L1_008_000M1_scaffold_564_7
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5604..6629)
DNA (1026bp) protein (342aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
S-adenosylmethionine--tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=5 Tax=Clostridiales RepID=A5KPU6_9FIRM
L1_008_000M1_scaffold_564_8
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6672..9116)
DNA (2445bp) protein (815aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Phenylalanine--tRNA ligase beta subunit n=3 Tax=Lachnospiraceae RepID=A5KPU5_9FIRM
phenylalanyl-tRNA synthetase subunit beta
L1_008_000M1_scaffold_564_9
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9145..10182)
DNA (1038bp) protein (346aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016844};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Phenylalanine--tRNA ligase alpha subunit n=4 Tax=Clostridiales RepID=A5KPU4_9FIRM
phenylalanyl-tRNA synthetase subunit alpha
L1_008_000M1_scaffold_564_10
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10754..11221)
DNA (468bp) protein (156aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A5KPU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26004.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L1_008_000M1_scaffold_564_11
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11226..11642)
DNA (417bp) protein (139aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KPU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26005.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L1_008_000M1_scaffold_564_12
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11739..12257)
DNA (519bp) protein (173aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5QUX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26006.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L1_008_000M1_scaffold_564_13
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12334..14283)
DNA (1950bp) protein (650aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A5KPU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19731.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
membrane protein
L1_008_000M1_scaffold_564_14
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14456..14914)
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XG65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19730.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L1_008_000M1_scaffold_564_15
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14975..15292)
DNA (318bp) protein (106aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A5KPT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26009.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L1_008_000M1_scaffold_564_16
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15316..15777)
DNA (462bp) protein (154aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A5KPT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26010.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L1_008_000M1_scaffold_564_17
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15749..16111)
DNA (363bp) protein (121aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KPT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26011.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L1_008_000M1_scaffold_564_18
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16318..16611)
DNA (294bp) protein (98aa)
WXG100 family type VII secretion target n=3 Tax=Lachnospiraceae RepID=A5KPT5_9FIRM
ESAT-6-like protein {ECO:0000256|RuleBase:RU362001}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L1_008_000M1_scaffold_564_19
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16670..19528)
DNA (2859bp) protein (953aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XG60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19725.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
DNA segregation ATPase FtsK/SpoIIIE and related proteins
L1_008_000M1_scaffold_564_20
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19628..21193)
DNA (1566bp) protein (522aa)
Type VII secretion protein EssC n=3 Tax=Clostridiales RepID=R5QZ87_9FIRM
Type VII secretion protein EssC {ECO:0000313|EMBL:CCZ26012.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L1_008_000M1_scaffold_564_21
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21281..21529)
DNA (249bp) protein (83aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KPT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26013.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
YukD.
L1_008_000M1_scaffold_564_22
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21578..22636)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=A5KPT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26014.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
CobQ/CobB/MinD/ParA nucleotide binding domain.
L1_008_000M1_scaffold_564_23
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22652..23569)
DNA (918bp) protein (306aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5QBI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19721.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Uncharacterized conserved protein, contains FHA domain
L1_008_000M1_scaffold_564_24
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23609..25195)
DNA (1587bp) protein (529aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5QUY7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26016.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
hypothetical protein
L1_008_000M1_scaffold_564_25
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25302..25430)
DNA (129bp) protein (43aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A5KPS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26017.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L1_008_000M1_scaffold_564_26
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25531..27429)
DNA (1899bp) protein (633aa)
Kinase domain protein n=3 Tax=Lachnospiraceae RepID=A5KPS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19719.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L1_008_000M1_scaffold_564_27
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27543..32270)
DNA (4728bp) protein (1576aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XG53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19718.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L1_008_000M1_scaffold_564_28
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32263..34008)
DNA (1746bp) protein (582aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XG52_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19717.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L1_008_000M1_scaffold_564_29
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34005..34514)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_1_57FAA RepID=F7JE05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19716.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
L1_008_000M1_scaffold_564_30
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34571..35296)
DNA (726bp) protein (242aa)
Putative uncharacterized protein n=2 Tax=unclassified Lachnospiraceae RepID=E5XG50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19715.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
Displaying items 1-30 of 37 in total

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