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L1_008_000M1_scaffold_571

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_571_1
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3..974
DNA (972bp) protein (324aa)
Uncharacterized protein n=3 Tax=root RepID=B0MXL7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS02330.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Exodeoxyribonuclease V subunit gamma
L1_008_000M1_scaffold_571_2
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(988..1548)
DNA (561bp) protein (187aa)
haloacid dehalogenase n=1 Tax=Alistipes sp. JC136 RepID=UPI00028A31EA
HAD hydrolase family IA variant 3 {ECO:0000313|EMBL:CCZ95690.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
haloacid dehalogenase superfamily protein
L1_008_000M1_scaffold_571_3
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1548..2492)
DNA (945bp) protein (315aa)
Metalloendopeptidase-like membrane protein n=2 Tax=Alistipes RepID=I3YQC9_ALIFI
metalloendopeptidase-like membrane protein
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:AFL79197.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_008_000M1_scaffold_571_4
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2503..3498)
DNA (996bp) protein (332aa)
Peptidase, M23 family n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MXJ3_9BACT
Peptidase, M23 family {ECO:0000313|EMBL:EDS02334.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Membrane proteins related to metalloendopeptidases
L1_008_000M1_scaffold_571_5
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3581..6214
DNA (2634bp) protein (878aa)
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
alanyl-tRNA synthetase n=1 Tax=Alistipes senegalensis RepID=UPI0002F8D010
L1_008_000M1_scaffold_571_6
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6236..7765
DNA (1530bp) protein (510aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JGL5_9BACT
L1_008_000M1_scaffold_571_7
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8419..9366)
DNA (948bp) protein (316aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EDS02339.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EDS02339.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
4-phosphoerythronate dehydrogenase n=2 Tax=Alistipes RepID=B0MXJ8_9BACT
lactate dehydrogenase-like oxidoreductase
L1_008_000M1_scaffold_571_8
unknown

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9455..9586
DNA (132bp) protein (44aa)

This feature has no annotations

L1_008_000M1_scaffold_571_9
Bacteroides sp. CAG:770, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9677..12226
DNA (2550bp) protein (850aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:770 RepID=R6T7D1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC65639.1}; TaxID=1262751 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:770.;"
hypothetical protein
L1_008_000M1_scaffold_571_10
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12307..13029)
DNA (723bp) protein (241aa)
MoeB n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000307A40A
ThiF family protein {ECO:0000313|EMBL:EDS02342.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
dinucleotide-utilizing protein
L1_008_000M1_scaffold_571_11
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13034..13615)
DNA (582bp) protein (194aa)
Hydrolase TatD family n=1 Tax=Alistipes sp. CAG:29 RepID=R6YB10_9BACT
Hydrolase TatD family {ECO:0000313|EMBL:CDD25821.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Mg-dependent DNase
L1_008_000M1_scaffold_571_12
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13793..15148
DNA (1356bp) protein (452aa)
Na(+)-translocating NADH-quinone reductase subunit A {ECO:0000256|HAMAP-Rule:MF_00425, ECO:0000256|SAAS:SAAS00017509}; Short=Na(+)-NQR subunit A {ECO:0000256|HAMAP-Rule:MF_00425};; Short=Na(+)-translocating NQR subunit A {ECO:0000256|HAMAP-Rule:MF_00425};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00425, ECO:0000256|SAAS:SAAS00179150};; NQR complex subunit A {ECO:0000256|HAMAP-Rule:MF_00425}; NQR-1 subunit A {ECO:0000256|HAMAP-Rule:MF_00425}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Na(+)-translocating NADH-quinone reductase subunit A n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z5M5_9BACT
Na translocating NADH:ubiquinone oxidoreductase subunit A
L1_008_000M1_scaffold_571_13
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15151..16299
DNA (1149bp) protein (383aa)
Na(+)-translocating NADH-quinone reductase subunit B {ECO:0000256|HAMAP-Rule:MF_00426}; Short=Na(+)-NQR subunit B {ECO:0000256|HAMAP-Rule:MF_00426};; Short=Na(+)-translocating NQR subunit B {ECO:0000256|HAMAP-Rule:MF_00426};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00426};; NQR complex subunit B {ECO:0000256|HAMAP-Rule:MF_00426}; NQR-1 subunit B {ECO:0000256|HAMAP-Rule:MF_00426}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Alistipes onderdonkii RepID=UPI00035D7BAD
NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit
L1_008_000M1_scaffold_571_14
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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16305..17048
DNA (744bp) protein (248aa)
NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit (EC:1.6.5.-)
Na(+)-translocating NADH-quinone reductase subunit C {ECO:0000256|HAMAP-Rule:MF_00427}; Short=Na(+)-NQR subunit C {ECO:0000256|HAMAP-Rule:MF_00427};; Short=Na(+)-translocating NQR subunit C {ECO:0000256|HAMAP-Rule:MF_00427};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00427};; NQR complex subunit C {ECO:0000256|HAMAP-Rule:MF_00427}; NQR-1 subunit C {ECO:0000256|HAMAP-Rule:MF_00427}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
NADH:quinone oxidoreductase n=1 Tax=Alistipes senegalensis RepID=UPI0002FAC8C1
L1_008_000M1_scaffold_571_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17085..17717
DNA (633bp) protein (211aa)
Na(+)-translocating NADH-quinone reductase subunit D {ECO:0000256|HAMAP-Rule:MF_00428, ECO:0000256|SAAS:SAAS00170009}; Short=Na(+)-NQR subunit D {ECO:0000256|HAMAP-Rule:MF_00428};; Short=Na(+)-translocating NQR subunit D {ECO:0000256|HAMAP-Rule:MF_00428};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00428, ECO:0000256|SAAS:SAAS00179330};; NQR complex subunit D {ECO:0000256|HAMAP-Rule:MF_00428}; NQR-1 subunit D {ECO:0000256|HAMAP-Rule:MF_00428}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit (EC:1.6.5.-)
Na(+)-translocating NADH-quinone reductase subunit D n=1 Tax=Alistipes onderdonkii RepID=UPI000371CE1D
L1_008_000M1_scaffold_571_16
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17729..18349
DNA (621bp) protein (207aa)
Na(+)-translocating NADH-quinone reductase subunit E {ECO:0000256|HAMAP-Rule:MF_00429, ECO:0000256|SAAS:SAAS00170325}; Short=Na(+)-NQR subunit E {ECO:0000256|HAMAP-Rule:MF_00429};; Short=Na(+)-translocating NQR subunit E {ECO:0000256|HAMAP-Rule:MF_00429};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00429, ECO:0000256|SAAS:SAAS00179335};; NQR complex subunit E {ECO:0000256|HAMAP-Rule:MF_00429}; NQR-1 subunit E {ECO:0000256|HAMAP-Rule:MF_00429}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
NADH:ubiquinone oxidoreductase E subunit n=1 Tax=Alistipes sp. CAG:268 RepID=R6VHC5_9BACT
Na translocating NADH:ubiquinone oxidoreductase subunit E
L1_008_000M1_scaffold_571_17
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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18372..19634
DNA (1263bp) protein (421aa)
Na(+)-translocating NADH-quinone reductase subunit F {ECO:0000256|HAMAP-Rule:MF_00430}; Short=Na(+)-NQR subunit F {ECO:0000256|HAMAP-Rule:MF_00430};; Short=Na(+)-translocating NQR subunit F {ECO:0000256|HAMAP-Rule:MF_00430};; EC=1.6.5.8 {ECO:0000256|HAMAP-Rule:MF_00430};; NQR complex subunit F {ECO:0000256|HAMAP-Rule:MF_00430}; NQR-1 subunit F {ECO:0000256|HAMAP-Rule:MF_00430}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Na(+)-translocating NADH-quinone reductase subunit F n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F63CD2
NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
L1_008_000M1_scaffold_571_18
unknown

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19904..20689
DNA (786bp) protein (262aa)

This feature has no annotations

L1_008_000M1_scaffold_571_19
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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20711..20890
DNA (180bp) protein (60aa)
vacuolar-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
potassium transporter n=1 Tax=Alistipes sp. JC136 RepID=UPI0002882D82
L1_008_000M1_scaffold_571_20
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(21130..22176)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YQE5_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL79213.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_008_000M1_scaffold_571_21
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22343..24733)
DNA (2391bp) protein (797aa)
TonB family protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XRS7_9BACT
TonB family protein {ECO:0000313|EMBL:CDD24350.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Regulatory sensor-transducer
L1_008_000M1_scaffold_571_22
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(24730..25134)
DNA (405bp) protein (135aa)
Predicted transcriptional regulator n=1 Tax=Alistipes sp. CAG:268 RepID=R6WSJ8_9BACT
Predicted transcriptional regulator {ECO:0000313|EMBL:CDC97032.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
Predicted transcriptional regulator
L1_008_000M1_scaffold_571_23
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(25420..26352)
DNA (933bp) protein (311aa)
TonB-dependent receptor id=4460650 bin=GWF2_Bacteroidetes_49_14 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
TonB family protein
Tax=GWF2_Bacteroidetes_49_14_curated
L1_008_000M1_scaffold_571_24
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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26547..27134
DNA (588bp) protein (196aa)
HAD hydrolase, family IA, variant 3 n=2 Tax=Alistipes RepID=B0MXL2_9BACT
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EDS02353.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
L1_008_000M1_scaffold_571_25
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(27231..30512)
DNA (3282bp) protein (1094aa)
OmpA-related protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7JZ40_9BACE
Cna B-type domain protein {ECO:0000313|EMBL:KDS13985.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
TonB-dependent receptor
L1_008_000M1_scaffold_571_26
Haliotis rufescens, Haliotis, Gastropoda, Mollusca, Metazoa

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comp(30728..31585)
DNA (858bp) protein (286aa)
PREDICTED: hypothetical protein LOC100559191 n=1 Tax=Anolis carolinensis RepID=UPI0002038F85
Lustrin A {ECO:0000313|EMBL:AAB95154.1}; TaxID=6454 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Gastropoda; Vetigastropoda; Haliotoidea; Haliotidae; Haliotis.;" source="Haliotis rufescens (California red abalone).;"
hypothetical protein
L1_008_000M1_scaffold_571_27
Bacteroides sp. CAG:770, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31774..34173)
DNA (2400bp) protein (800aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:770 RepID=R6SYS8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC65115.1}; TaxID=1262751 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:770.;"
L1_008_000M1_scaffold_571_28
Bacteroides sp. CAG:770, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34236..35135)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:770 RepID=R6SV77_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDC65118.1}; TaxID=1262751 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:770.;"
L1_008_000M1_scaffold_571_29
unknown

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comp(35756..35914)
DNA (159bp) protein (53aa)

This feature has no annotations

L1_008_000M1_scaffold_571_30

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36407..37981
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003650EB9
Uncharacterized protein {ECO:0000313|EMBL:EJW93736.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
Displaying items 1-30 of 39 in total

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