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L1_008_000M1_scaffold_573

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_573_1
unknown

Not on your lists

comp(3..83)
DNA (81bp) protein (27aa)

This feature has no annotations

L1_008_000M1_scaffold_573_2
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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342..1085
DNA (744bp) protein (248aa)
Putative ferrous iron transport protein B n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MQH1_9FIRM
Putative ferrous iron transport protein B {ECO:0000313|EMBL:CDF02188.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
putative ferrous iron transport protein B
L1_008_000M1_scaffold_573_3
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1245..2933
DNA (1689bp) protein (563aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036E9320
Uncharacterized protein {ECO:0000313|EMBL:EFR57575.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
sialate O-acetylesterase
L1_008_000M1_scaffold_573_4
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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2943..3860
DNA (918bp) protein (306aa)
Transcriptional regulator n=1 Tax=Megamonas hypermegale ART12/1 RepID=D4KE05_9FIRM
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBL06602.1}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L1_008_000M1_scaffold_573_5
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3973..6240
DNA (2268bp) protein (756aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H590_9FIRM
L1_008_000M1_scaffold_573_6
Desulfosporosinus sp. Tol-M, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6242..7102
DNA (861bp) protein (287aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1536651 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. Tol-M.;"
Methylenetetrahydrofolate reductase n=2 Tax=Clostridiales RepID=B0NI34_CLOSV
5,10-methylenetetrahydrofolate reductase
L1_008_000M1_scaffold_573_7
Eggerthella sp. CAG:298, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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7234..8358
DNA (1125bp) protein (375aa)
Aldo/keto reductase n=1 Tax=Eggerthella sp. CAG:298 RepID=R7B5A7_9ACTN
Aldo/keto reductase {ECO:0000313|EMBL:CDD59812.1}; TaxID=1262876 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:298.;"
aldo/keto reductase
L1_008_000M1_scaffold_573_8
Ruminococcus sp. CAG:382, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8370..9239
DNA (870bp) protein (290aa)
Beta-lactamase n=1 Tax=Ruminococcus sp. CAG:382 RepID=R6W7Z2_9FIRM
Beta-lactamase {ECO:0000313|EMBL:CDD02899.1}; TaxID=1262957 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:382.;"
hypothetical protein
L1_008_000M1_scaffold_573_9
Desulfitobacterium dichloroeliminans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9310..11253
DNA (1944bp) protein (648aa)
Asparagine synthetase n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F5K8_DESDL
asparagine synthase
Asparagine synthase, glutamine-hydrolyzing {ECO:0000313|EMBL:AGA68330.1}; TaxID=871963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1).;"
L1_008_000M1_scaffold_573_10
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11368..13506
DNA (2139bp) protein (713aa)
Formate acetyltransferase 2 n=1 Tax=Clostridium sp. CAG:448 RepID=R6SPH8_9CLOT
Formate acetyltransferase 2 {ECO:0000313|EMBL:CDC63123.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
pyruvate formate-lyase
L1_008_000M1_scaffold_573_11
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13503..14402
DNA (900bp) protein (300aa)
glycyl-radical enzyme activating family protein (EC:1.97.1.-)
Glycyl-radical enzyme activating protein family protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6MZ73_9CLOT
Glycyl-radical enzyme activating protein family protein {ECO:0000313|EMBL:CDC04100.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L1_008_000M1_scaffold_573_12
unknown

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14486..15250
DNA (765bp) protein (255aa)

This feature has no annotations

L1_008_000M1_scaffold_573_13
unknown

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15309..16067
DNA (759bp) protein (253aa)

This feature has no annotations

L1_008_000M1_scaffold_573_14
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16219..18129
DNA (1911bp) protein (637aa)
Spore coat protein CotH n=1 Tax=Clostridium sp. CAG:448 RepID=R6T448_9CLOT
Spore coat protein CotH {ECO:0000313|EMBL:CDC62541.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
dockerin-like protein
L1_008_000M1_scaffold_573_15
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18222..21443)
DNA (3222bp) protein (1074aa)
Spore coat protein CotH n=1 Tax=Clostridium sp. CAG:448 RepID=R6T411_9CLOT
Spore coat protein CotH {ECO:0000313|EMBL:CDC62496.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
spore coat protein CotH
L1_008_000M1_scaffold_573_16
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21440..24649)
DNA (3210bp) protein (1070aa)
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
hypothetical protein n=1 Tax=Paenibacillus ginsengihumi RepID=UPI00035E7E65
L1_008_000M1_scaffold_573_17
unknown

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25149..25511
DNA (363bp) protein (121aa)

This feature has no annotations

L1_008_000M1_scaffold_573_18
unknown

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25453..25656
DNA (204bp) protein (68aa)

This feature has no annotations

L1_008_000M1_scaffold_573_19
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25734..26300
DNA (567bp) protein (189aa)
Acetyltransferase, ribosomal protein N-acetylase n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U6C3_9CLOT
Acetyltransferase, ribosomal protein N-acetylase {ECO:0000313|EMBL:EKQ56727.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
acetyltransferase
L1_008_000M1_scaffold_573_20
Thermoanaerobacterium thermosaccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

26548..27660
DNA (1113bp) protein (371aa)
Putative oxidoreductase of aldo/keto reductase family n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IIB3_THETR
putative oxidoreductase of aldo/keto reductase family
Putative oxidoreductase of aldo/keto reductase family {ECO:0000313|EMBL:AGB18494.1}; TaxID=698948 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium thermosaccharolyticum M0795.;"
L1_008_000M1_scaffold_573_21
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27681..28073
DNA (393bp) protein (131aa)
MerR family transcriptional regulator n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GKL3_EUBLK
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:ADO36020.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L1_008_000M1_scaffold_573_22
unknown

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28187..28708
DNA (522bp) protein (174aa)

This feature has no annotations

L1_008_000M1_scaffold_573_23
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28809..29489
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0002E3AD6B
lysophospholipase L1-like esterase
Tax=BJP_IG2069_Clostridiales_48_15
L1_008_000M1_scaffold_573_24
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29502..30452)
DNA (951bp) protein (317aa)
Tagatose-6-phosphate kinase {ECO:0000256|PIRNR:PIRNR000535}; EC=2.7.1.144 {ECO:0000256|PIRNR:PIRNR000535};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
fruK; 1-phosphofructokinase (EC:2.7.1.56)
Tagatose-6-phosphate kinase n=1 Tax=Anaerotruncus colihominis DSM 17241 PF90_9FIRM">RepID=B0PF90_9FIRM
L1_008_000M1_scaffold_573_25
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30449..32320)
DNA (1872bp) protein (624aa)
ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458, ECO:0000313|EMBL:CBK79144.1};; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Coprococcus catus GD/7 RepID=D4J473_9FIRM
L1_008_000M1_scaffold_573_26
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32434..34947
DNA (2514bp) protein (838aa)
Alpha-L-rhamnosidase N-terminal domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EA71_9CLOT
Alpha-L-rhamnosidase N-terminal domain protein {ECO:0000313|EMBL:EEG31690.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
alpha-L-rhamnosidase
L1_008_000M1_scaffold_573_27
unknown

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35005..36528
DNA (1524bp) protein (508aa)

This feature has no annotations

L1_008_000M1_scaffold_573_28
unknown

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36512..38209
DNA (1698bp) protein (566aa)

This feature has no annotations

L1_008_000M1_scaffold_573_29
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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38259..38951
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M1P7_CLOCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV70276.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L1_008_000M1_scaffold_573_30
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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38966..39967
DNA (1002bp) protein (334aa)
Uncharacterized protein n=7 Tax=Clostridium thermocellum RepID=E6UPH1_CLOTL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABN52988.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 /; NCIMB 10682 / NRRL B-4536 / VPI 7372) (Ruminiclostridium; thermocellum).;"
Displaying items 1-30 of 36 in total

View Taxonomy