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L1_008_000M1_scaffold_579

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Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_579_1
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(1..756)
DNA (756bp) protein (252aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211017};; Arginosuccinase {ECO:0000256|HAMAP-Rule:MF_00006}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Argininosuccinate lyase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MKF8_9FIRM
argininosuccinate lyase
L1_008_000M1_scaffold_579_2
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(894..2114)
DNA (1221bp) protein (407aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MW78_9FIRM
L1_008_000M1_scaffold_579_3
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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2232..2735
DNA (504bp) protein (168aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
ruvC; crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6N1A9_9FIRM
L1_008_000M1_scaffold_579_4
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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3015..3602
DNA (588bp) protein (196aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MKG0_9FIRM
Holliday junction DNA helicase RuvA
L1_008_000M1_scaffold_579_5
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

3632..4639
DNA (1008bp) protein (336aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Holliday junction ATP-dependent DNA helicase RuvB n=2 Tax=root RepID=R6MMY9_9FIRM
ruvB; Holliday junction DNA helicase RuvB
L1_008_000M1_scaffold_579_6
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

4692..6251
DNA (1560bp) protein (520aa)
Cell wall hydrolase/autolysin n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NR28_9FIRM
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:CDC00117.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
cell wall hydrolase/autolysin
L1_008_000M1_scaffold_579_7
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

6312..7151
DNA (840bp) protein (280aa)
Sigma-E processing peptidase SpoIIGA n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MW87_9FIRM
Sigma-E processing peptidase SpoIIGA {ECO:0000313|EMBL:CDC00119.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
sigma-E processing peptidase SpoIIGA
L1_008_000M1_scaffold_579_8
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

7166..7879
DNA (714bp) protein (238aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6N1B7_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
RNA polymerase sigma-E factor
L1_008_000M1_scaffold_579_9
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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7950..8720
DNA (771bp) protein (257aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MKH0_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
sigG; RNA polymerase sigma-G factor
L1_008_000M1_scaffold_579_10
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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8890..9975
DNA (1086bp) protein (362aa)
Transcriptional regulator CdaR n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MMZ7_9FIRM
Transcriptional regulator CdaR {ECO:0000313|EMBL:CDC00125.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
transcriptional regulator CdaR
L1_008_000M1_scaffold_579_11
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

10042..11256
DNA (1215bp) protein (405aa)
Carboxyl-terminal protease n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NR35_9FIRM
Carboxyl-terminal protease {ECO:0000313|EMBL:CDC00127.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
carboxyl-terminal protease
L1_008_000M1_scaffold_579_12
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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11332..13311
DNA (1980bp) protein (660aa)
Sulfatase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NR40_9FIRM
Sulfatase {ECO:0000313|EMBL:CDC00132.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L1_008_000M1_scaffold_579_13
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(13343..14212)
DNA (870bp) protein (290aa)
Uncharacterized protein n=2 Tax=root RepID=R6MKH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC00133.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
putative xylanase/chitin deacetylase
L1_008_000M1_scaffold_579_14
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(14268..15131)
DNA (864bp) protein (288aa)
fba1; fructose-bisphosphate aldolase Fba (EC:4.1.2.13)
Fructose-1 6-bisphosphate aldolase class II n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MN04_9FIRM
Fructose-1 6-bisphosphate aldolase class II {ECO:0000313|EMBL:CDC00135.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L1_008_000M1_scaffold_579_15
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(15190..15813)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MKI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC00138.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L1_008_000M1_scaffold_579_16
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(15874..16746)
DNA (873bp) protein (291aa)
8-oxoguanine DNA glycosylase domain protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MWA4_9FIRM
8-oxoguanine DNA glycosylase domain protein {ECO:0000313|EMBL:CDC00139.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
8-oxoguanine DNA glycosylase domain-containing protein
L1_008_000M1_scaffold_579_17
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

17038..18453
DNA (1416bp) protein (472aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
M18 family aminopeptidase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6N1D5_9FIRM
aspartyl aminopeptidase
L1_008_000M1_scaffold_579_18
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(18499..19311)
DNA (813bp) protein (271aa)
Putative membrane protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MKI5_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CDC00143.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
membrane protein
L1_008_000M1_scaffold_579_19
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

19671..20696
DNA (1026bp) protein (342aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:2.4.99.17)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MN10_9FIRM
L1_008_000M1_scaffold_579_20
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

20709..21839
DNA (1131bp) protein (377aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6N1D9_9FIRM
L1_008_000M1_scaffold_579_21
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

21944..22663
DNA (720bp) protein (240aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Uridylate kinase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NR50_9FIRM
uridylate kinase
L1_008_000M1_scaffold_579_22
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

22697..23248
DNA (552bp) protein (184aa)
Ribosome-recycling factor n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MKI8_9FIRM
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
ribosome recycling factor
L1_008_000M1_scaffold_579_23
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

23320..24060
DNA (741bp) protein (247aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Isoprenyl transferase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MWB1_9FIRM
UppS; undecaprenyl pyrophosphate synthase
L1_008_000M1_scaffold_579_24
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

24063..24899
DNA (837bp) protein (279aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Phosphatidate cytidylyltransferase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MN15_9FIRM
CDP-diglyceride synthetase
L1_008_000M1_scaffold_579_25
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

24930..26093
DNA (1164bp) protein (388aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6N1E4_9FIRM
L1_008_000M1_scaffold_579_26
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

26090..27244
DNA (1155bp) protein (385aa)
Membrane-associated zinc metalloprotease n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NR54_9FIRM
Membrane-associated zinc metalloprotease {ECO:0000313|EMBL:CDC00152.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
membrane-associated zinc metalloprotease
L1_008_000M1_scaffold_579_27
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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27256..28302
DNA (1047bp) protein (349aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MKJ1_9FIRM
L1_008_000M1_scaffold_579_28
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

28323..28757
DNA (435bp) protein (145aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
aroQ; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MWB4_9FIRM
L1_008_000M1_scaffold_579_29
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

28742..29794
DNA (1053bp) protein (351aa)
Peptidase M24 n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MN18_9FIRM
Peptidase M24 {ECO:0000313|EMBL:CDC00155.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
peptidase M24
L1_008_000M1_scaffold_579_30
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(29840..30823)
DNA (984bp) protein (328aa)
stage IV sporulation protein B (EC:3.4.21.116)
SpoIVB peptidase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6N1E9_9FIRM
SpoIVB peptidase {ECO:0000313|EMBL:CDC00156.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Displaying items 1-30 of 47 in total

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