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L1_008_000M1_scaffold_592

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_592_1
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(138..1187)
DNA (1050bp) protein (350aa)
Peptidase, M23 family n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MT55_9BACT
Peptidase, M23 family {ECO:0000313|EMBL:EDS04505.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Membrane proteins related to metalloendopeptidases
L1_008_000M1_scaffold_592_2
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1213..1788)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5WWD7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ96792.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Protein of unknown function (DUF3109).
L1_008_000M1_scaffold_592_3
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1785..2777)
DNA (993bp) protein (331aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
D-alanine--D-alanine ligase n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MT57_9BACT
ATP-grasp enzyme, D-alanine-D-alanine ligase
L1_008_000M1_scaffold_592_4
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2783..3595)
DNA (813bp) protein (271aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
nicotinate/nicotinamide nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MT58_9BACT
L1_008_000M1_scaffold_592_5
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3592..4164)
DNA (573bp) protein (191aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MT59_9BACT
L1_008_000M1_scaffold_592_6
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4166..5047)
DNA (882bp) protein (294aa)
TIGR00255 family protein n=1 Tax=Alistipes sp. CAG:268 RepID=R6VJQ3_9BACT
TIGR00255 family protein {ECO:0000313|EMBL:CDC97205.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
conserved hypothetical protein TIGR00255
L1_008_000M1_scaffold_592_7
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5251..6321
DNA (1071bp) protein (357aa)
phosphoserine aminotransferase apoenzyme (EC:2.6.1.52)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000313|EMBL:CBK63290.1};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
MFS transporter n=1 Tax=Alistipes senegalensis RepID=UPI0002DEB84C
L1_008_000M1_scaffold_592_8
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6414..7337
DNA (924bp) protein (308aa)
4-phosphoerythronate dehydrogenase n=3 Tax=root RepID=B0MT62_9BACT
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:CDE63778.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
phosphoglycerate dehydrogenase-like oxidoreductase
L1_008_000M1_scaffold_592_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7362..8606
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XSJ2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24600.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_008_000M1_scaffold_592_10
Prevotella sp. oral taxon 473, Alloprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8696..9154)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Prevotella sp. oral taxon 473 str. F0040 RepID=L1M9R2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKX87947.1}; TaxID=1035197 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Alloprevotella.;" source="Prevotella sp. oral taxon 473 str. F0040.;"
membrane protein
L1_008_000M1_scaffold_592_11
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9406..9633
DNA (228bp) protein (76aa)
4Fe-4S binding domain. (EC:1.2.7.3)
4Fe-4S binding domain {ECO:0000313|EMBL:CBK63288.1}; EC=1.2.7.3 {ECO:0000313|EMBL:CBK63288.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
ferredoxin n=1 Tax=Alistipes sp. JC136 RepID=UPI0002885F3F
L1_008_000M1_scaffold_592_12
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9637..10734
DNA (1098bp) protein (366aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-binding domain protein n=3 Tax=root RepID=B0MT44_9BACT
Pyruvate flavodoxin/ferredoxin oxidoreductase thiamine diP-binding domain protein {ECO:0000313|EMBL:CDE63784.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
2-oxoacid:ferredoxin oxidoreductase subunit alpha
L1_008_000M1_scaffold_592_13
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10739..11500
DNA (762bp) protein (254aa)
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein n=1 Tax=Alistipes sp. HGB5 RepID=E4MD01_9BACT
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein {ECO:0000313|EMBL:EFR57173.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
2-oxoacid:ferredoxin oxidoreductase subunit beta
L1_008_000M1_scaffold_592_14
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11516..12061
DNA (546bp) protein (182aa)
2-oxoacid:ferredoxin/flavodoxin oxidoreductase gamma subunit n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JJE4_9BACT
2-oxoacid:ferredoxin/flavodoxin oxidoreductase gamma subunit {ECO:0000313|EMBL:CDE63786.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
2-oxoacid:ferredoxin oxidoreductase subunit gamma
L1_008_000M1_scaffold_592_15
Coprobacter fastidiosus, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12340..13263)
DNA (924bp) protein (308aa)
Uncharacterized protein n=3 Tax=Porphyromonadaceae RepID=R7DCQ0_9PORP
LysR family transcriptional regulator {ECO:0000313|EMBL:ERM89896.1}; TaxID=1349822 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter fastidiosus NSB1.;"
LysR family transcriptional regulator
L1_008_000M1_scaffold_592_16
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13400..14083
DNA (684bp) protein (228aa)
Uncharacterized protein n=2 Tax=Tannerella RepID=R7DEJ2_9PORP
peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AHF12026.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
L1_008_000M1_scaffold_592_17

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14133..14510
DNA (378bp) protein (126aa)
Thioredoxin {ECO:0000313|EMBL:EKC50373.1}; EC=1.8.4.2 {ECO:0000313|EMBL:EKC50373.1};; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Thioredoxin n=2 Tax=root RepID=B0MT47_9BACT
thioredoxin
L1_008_000M1_scaffold_592_18
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(14737..15726)
DNA (990bp) protein (330aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
methionyl-tRNA formyltransferase (EC:2.1.2.9)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002DCC41F
L1_008_000M1_scaffold_592_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(15752..16114)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002EA3D67
Glyoxalase family protein {ECO:0000313|EMBL:CDD14634.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glyoxalase
L1_008_000M1_scaffold_592_20
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(16123..17349)
DNA (1227bp) protein (409aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MT76_9BACT
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase
L1_008_000M1_scaffold_592_21
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(17361..18824)
DNA (1464bp) protein (488aa)
Putative permease n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y7F9_9BACT
Putative permease {ECO:0000313|EMBL:CDD24571.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Predicted permeases
L1_008_000M1_scaffold_592_22
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(18821..19657)
DNA (837bp) protein (279aa)
membrane protein n=1 Tax=Alistipes senegalensis RepID=UPI00031E1F36
ABC 3 transport family protein {ECO:0000313|EMBL:CDE63797.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Mn2+/Zn2+ ABC transporter permease
L1_008_000M1_scaffold_592_23
unknown

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comp(19871..20665)
DNA (795bp) protein (265aa)

This feature has no annotations

L1_008_000M1_scaffold_592_24
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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20760..22058
DNA (1299bp) protein (433aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Alistipes sp. CAG:268 RepID=R6VJL9_9BACT
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:CDC97160.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
MiaB-like tRNA modifying enzyme
L1_008_000M1_scaffold_592_25
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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22191..22946
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y7F5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24566.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_008_000M1_scaffold_592_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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22952..24397
DNA (1446bp) protein (482aa)
Trk-type K+ transport system membrane component n=1 Tax=Alistipes sp. CAG:29 RepID=R6XSG6_9BACT
Trk-type K+ transport system membrane component {ECO:0000313|EMBL:CDD24565.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Trk-type K+ transport system, membrane component
L1_008_000M1_scaffold_592_27
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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24400..25932
DNA (1533bp) protein (511aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R5W319_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ97553.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L1_008_000M1_scaffold_592_28
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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25978..26442
DNA (465bp) protein (155aa)
serine protease n=1 Tax=Alistipes onderdonkii RepID=UPI00036DD612
membrane-bound serine protease
Nodulation efficiency protein D {ECO:0000313|EMBL:CDE63808.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L1_008_000M1_scaffold_592_29
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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26464..27429
DNA (966bp) protein (322aa)
UPF0365 protein BN590_01598 n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y7F2_9BACT
UPF0365 protein BN590_01598 {ECO:0000256|HAMAP-Rule:MF_01562}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_008_000M1_scaffold_592_30
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27530..28297)
DNA (768bp) protein (256aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=I3YR65_ALIFI
hypothetical protein
Zinc finger CDGSH type {ECO:0000313|EMBL:EFR57086.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Displaying items 1-30 of 42 in total

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