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L1_008_000M1_scaffold_600

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_600_1
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..175)
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R6NG86_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC07404.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_600_2
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

349..585
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R6N5V5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC07403.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_600_3
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

663..3167
DNA (2505bp) protein (835aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
Endonuclease MutS2 n=1 Tax=Clostridium sp. CAG:269 RepID=R7IXP9_9CLOT
MutS2 family protein
L1_008_000M1_scaffold_600_4
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3182..3475)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6NMF4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC07401.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_600_5
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3537..4340)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6N8F9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC07400.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
hypothetical protein
L1_008_000M1_scaffold_600_6
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4374..4970)
DNA (597bp) protein (199aa)
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium sp. CAG:269 RepID=R7IX60_9CLOT
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000313|EMBL:CDE56151.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L1_008_000M1_scaffold_600_7
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4957..6258)
DNA (1302bp) protein (434aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium sp. CAG:343 RepID=R6N5U6_9CLOT
L1_008_000M1_scaffold_600_8
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6398..8845)
DNA (2448bp) protein (816aa)
ATPase AAA-2 domain protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IWZ9_9CLOT
ATPase AAA-2 domain protein {ECO:0000313|EMBL:CDE56154.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
chaperone ATPase
L1_008_000M1_scaffold_600_9
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8874..9887)
DNA (1014bp) protein (338aa)
Putative ATP:guanido phosphotransferase Clo1313_2463 n=1 Tax=Clostridium sp. CAG:343 RepID=R6NME7_9CLOT
Putative ATP:guanido phosphotransferase Clo1313_2463 {ECO:0000313|EMBL:CDC07396.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
ATP:guanido phosphotransferase
L1_008_000M1_scaffold_600_10
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9902..10459)
DNA (558bp) protein (186aa)
UvrB/UvrC protein n=2 Tax=environmental samples RepID=R6N8F2_9CLOT
UvrB/UvrC protein {ECO:0000313|EMBL:CDC07395.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
UvrB/UvrC protein
L1_008_000M1_scaffold_600_11
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10473..11045)
DNA (573bp) protein (191aa)
Transcriptional repressor of class III stress genes n=1 Tax=Clostridium sp. CAG:343 RepID=R6NG75_9CLOT
Transcriptional repressor of class III stress genes {ECO:0000313|EMBL:CDC07394.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
ctsR; transcriptional regulator CtsR
L1_008_000M1_scaffold_600_12
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11139..11318)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IX47_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE56165.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
L1_008_000M1_scaffold_600_13
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11719..12165
DNA (447bp) protein (149aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R6N8E5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC07390.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
hypothetical protein
L1_008_000M1_scaffold_600_14
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12204..13115
DNA (912bp) protein (304aa)
Band 7 protein n=2 Tax=environmental samples RepID=R6PBX1_9CLOT
Band 7 protein {ECO:0000313|EMBL:CDC07387.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
hypothetical protein
L1_008_000M1_scaffold_600_15
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(13188..13373)
DNA (186bp) protein (62aa)
Serine/threonine protein kinase n=2 Tax=Chloroflexus RepID=A9WD85_CHLAA
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABY35052.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
L1_008_000M1_scaffold_600_16
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13539..13751)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6N0Z5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC05648.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_600_17
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14068..15069)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IXS3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE56168.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
hypothetical protein
L1_008_000M1_scaffold_600_18
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15202..15894)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6N5S6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC07383.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
hypothetical protein
L1_008_000M1_scaffold_600_19
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15998..16702)
DNA (705bp) protein (235aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R6NMD2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC07381.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
hypothetical protein
L1_008_000M1_scaffold_600_20
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16709..18250)
DNA (1542bp) protein (514aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Clostridium sp. CAG:343 RepID=R6NG55_9CLOT
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
L1_008_000M1_scaffold_600_21
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18284..19036)
DNA (753bp) protein (251aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=2 Tax=environmental samples RepID=R6PBW2_9CLOT
L1_008_000M1_scaffold_600_22
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19117..20301)
DNA (1185bp) protein (395aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
pgk; phosphoglycerate kinase Pgk (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Clostridium sp. CAG:343 RepID=R6N8C7_9CLOT
L1_008_000M1_scaffold_600_23
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20540..20881)
DNA (342bp) protein (114aa)
Type II secretion system protein G n=1 Tax=Clostridium sp. CAG:343 RepID=R6N5R4_9CLOT
Type II secretion system protein G {ECO:0000313|EMBL:CDC07373.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_600_24
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20981..21997)
DNA (1017bp) protein (339aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase type I n=2 Tax=environmental samples RepID=R6PBV8_9CLOT
L1_008_000M1_scaffold_600_25
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22107..24095)
DNA (1989bp) protein (663aa)
Glycoside hydrolase 15-related protein n=1 Tax=Clostridium sp. CAG:343 RepID=R6N8C2_9CLOT
Glycoside hydrolase 15-related protein {ECO:0000313|EMBL:CDC07370.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
glycosyl hydrolase family protein
L1_008_000M1_scaffold_600_26
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24095..25738)
DNA (1644bp) protein (548aa)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Clostridium sp. CAG:343 RepID=R6N5Q7_9CLOT
RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:CDC07368.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
RNA-metabolising metallo-beta-lactamase
L1_008_000M1_scaffold_600_27
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25804..26151)
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R6PBV5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC07367.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_600_28
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26195..27388)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:269 RepID=R7IX24_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC07366.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
L1_008_000M1_scaffold_600_29
Clostridium sp. CAG:269, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27418..29850)
DNA (2433bp) protein (811aa)
Cell division protein FtsK/SpoIIIE n=1 Tax=Clostridium sp. CAG:269 RepID=R7IX63_9CLOT
Cell division protein FtsK/SpoIIIE {ECO:0000313|EMBL:CDE56180.1}; TaxID=1262788 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:269.;"
cell division protein FtsK
L1_008_000M1_scaffold_600_30
Clostridium sp. CAG:343, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29979..30482)
DNA (504bp) protein (168aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R6PBV1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC07362.1}; TaxID=1262796 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:343.;"
H+-ATPase subunit H
Displaying items 1-30 of 74 in total

View Taxonomy