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L1_008_000M1_scaffold_639

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_639_1
unknown

Not on your lists

2..196
DNA (195bp) protein (65aa)

This feature has no annotations

L1_008_000M1_scaffold_639_2
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(324..623)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EAS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97623.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L1_008_000M1_scaffold_639_3
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(974..2275)
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KFW7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61102.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L1_008_000M1_scaffold_639_4
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2405..6307)
DNA (3903bp) protein (1301aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JTF9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61101.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
chromosome segregation ATPase-like protein
L1_008_000M1_scaffold_639_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6304..7440)
DNA (1137bp) protein (379aa)
TIGR02678 family protein n=8 Tax=Clostridium clostridioforme RepID=N9WV08_9CLOT
TIGR02678 family protein {ECO:0000313|EMBL:ENZ61985.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L1_008_000M1_scaffold_639_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7443..8912)
DNA (1470bp) protein (490aa)
TIGR02677 family protein n=9 Tax=Clostridium RepID=N9VWA9_9CLOT
TIGR02677 family protein {ECO:0000313|EMBL:ENZ11476.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L1_008_000M1_scaffold_639_7
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8924..10231)
DNA (1308bp) protein (436aa)
Putative ATP/GTP-binding protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T0D6_ROSHA
putative ATP/GTP-binding protein
Putative ATP/GTP-binding protein {ECO:0000313|EMBL:AEN95931.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_639_8
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(10375..11388)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EJW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97624.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L1_008_000M1_scaffold_639_9
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(11401..11769)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ECN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97625.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L1_008_000M1_scaffold_639_10
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(11759..13525)
DNA (1767bp) protein (589aa)
Radical SAM additional 4Fe4S-binding domain protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F6L2_9FIRM
Radical SAM additional 4Fe4S-binding domain protein {ECO:0000313|EMBL:CDA97627.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
radical SAM protein
L1_008_000M1_scaffold_639_11
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(13515..14900)
DNA (1386bp) protein (462aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EAT0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97628.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L1_008_000M1_scaffold_639_12
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(14990..16201)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EJW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97629.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L1_008_000M1_scaffold_639_13
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(16459..16698)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ECN8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97630.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
hypothetical protein
L1_008_000M1_scaffold_639_14

Not on your lists

comp(16695..17015)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1SWA3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC59609.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_008_000M1_scaffold_639_15
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17270..17785)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GL69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY13507.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
hypothetical protein
L1_008_000M1_scaffold_639_16
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17910..18170)
DNA (261bp) protein (87aa)
Helix-turn-helix n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6R0L3_9FIRM
Helix-turn-helix {ECO:0000313|EMBL:CDC36646.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
Helix-turn-helix.
L1_008_000M1_scaffold_639_17
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(18631..18933)
DNA (303bp) protein (101aa)
DNA-binding helix-turn-helix protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6F6L7_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDA97632.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
Predicted transcriptional regulators
L1_008_000M1_scaffold_639_18
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(18935..20149)
DNA (1215bp) protein (405aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
RNA-splicing ligase RtcB n=2 Tax=root RepID=R6EAT4_9FIRM
hypothetical protein
L1_008_000M1_scaffold_639_19
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(20328..20504)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6EJX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA97634.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L1_008_000M1_scaffold_639_20
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(20789..21919)
DNA (1131bp) protein (377aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ECP4_9FIRM
Glycerate kinase {ECO:0000313|EMBL:CDA97635.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L1_008_000M1_scaffold_639_21
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22181..22714
DNA (534bp) protein (178aa)
Sugar diacid utilization regulator n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LPZ0_9FIRM
Sugar diacid utilization regulator
Sugar diacid utilization regulator {ECO:0000313|EMBL:CBL22848.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L1_008_000M1_scaffold_639_22
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22822..25053)
DNA (2232bp) protein (744aa)
serine protease n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000381819C
Serine protease {ECO:0000313|EMBL:KEZ88076.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
peptidase S8 domain protein
L1_008_000M1_scaffold_639_23
Dehalobacter restrictus, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25046..26113)
DNA (1068bp) protein (356aa)
ATPase AAA n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036F61AD
ATPase AAA
ATPase AAA {ECO:0000313|EMBL:AHF10483.1}; TaxID=871738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter restrictus DSM 9455.;"
L1_008_000M1_scaffold_639_24
unknown

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comp(26279..26437)
DNA (159bp) protein (53aa)

This feature has no annotations

L1_008_000M1_scaffold_639_25
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

comp(26434..26736)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5ERJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX93959.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
hypothetical protein
L1_008_000M1_scaffold_639_26
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26873..28585)
DNA (1713bp) protein (571aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3B3Q0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG92031.1}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
hypothetical protein
L1_008_000M1_scaffold_639_27
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28590..30209)
DNA (1620bp) protein (540aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3B3P9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG92030.1}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
RecQ familyATP-dependent DNA helicase
L1_008_000M1_scaffold_639_28
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30210..31175)
DNA (966bp) protein (322aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3B3P8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG92029.1}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
L1_008_000M1_scaffold_639_29
unknown

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comp(31286..31630)
DNA (345bp) protein (115aa)

This feature has no annotations

L1_008_000M1_scaffold_639_30
[Eubacterium] cellulosolvens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31696..36075)
DNA (4380bp) protein (1460aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. AE3009 RepID=UPI0003B3F3F5
Uncharacterized protein {ECO:0000313|EMBL:EIM58089.1}; TaxID=633697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] cellulosolvens 6.;"
hypothetical protein
Displaying items 1-30 of 39 in total

View Taxonomy