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L1_008_000M1_scaffold_645

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_645_1
unknown

Not on your lists

comp(3..65)
DNA (63bp) protein (21aa)

This feature has no annotations

L1_008_000M1_scaffold_645_2
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(633..1997)
DNA (1365bp) protein (455aa)
UPF0210 protein EUBHAL_01322 n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EV84_9FIRM
UPF0210 protein EUBHAL_01322 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L1_008_000M1_scaffold_645_3
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2010..2297)
DNA (288bp) protein (96aa)
UPF0237 protein EUBHAL_01321 n=3 Tax=Eubacterium RepID=C0EV83_9FIRM
UPF0237 protein BN476_00117 {ECO:0000256|HAMAP-Rule:MF_01054}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
ACT domain-containing protein
L1_008_000M1_scaffold_645_4
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2399..3190)
DNA (792bp) protein (264aa)
Metallo-beta-lactamase domain protein n=2 Tax=Eubacterium RepID=C0EV82_9FIRM
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDB17539.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Metal-dependent hydrolases of the beta-lactamase superfamily I
L1_008_000M1_scaffold_645_5
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3258..3890)
DNA (633bp) protein (211aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EV81_9FIRM
L1_008_000M1_scaffold_645_6
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3877..6513)
DNA (2637bp) protein (879aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GTZ3_9FIRM
L1_008_000M1_scaffold_645_7
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6760..7101)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G8B6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17536.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L1_008_000M1_scaffold_645_8
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7171..8547)
DNA (1377bp) protein (459aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EV78_9FIRM
L1_008_000M1_scaffold_645_9
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8627..9907)
DNA (1281bp) protein (427aa)
Peptidase, M16 family n=2 Tax=Eubacterium RepID=C0EV77_9FIRM
Peptidase M16 family {ECO:0000313|EMBL:CDB17224.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
mlpA; peptidase-like protein MlpA
L1_008_000M1_scaffold_645_10
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9923..13489)
DNA (3567bp) protein (1189aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
pyruvate carboxylase (EC:6.4.1.1)
Pyruvate carboxylase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FYS3_9FIRM
L1_008_000M1_scaffold_645_11
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13688..14464
DNA (777bp) protein (259aa)
BMC domain protein n=2 Tax=Eubacterium RepID=C0EV75_9FIRM
BMC domain protein {ECO:0000313|EMBL:CDB17226.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
microcompartments protein
L1_008_000M1_scaffold_645_12
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14535..15257
DNA (723bp) protein (241aa)
Flavin reductase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GSX2_9FIRM
Flavin reductase {ECO:0000313|EMBL:CDB17227.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
NADPH-dependent FMN reductase
L1_008_000M1_scaffold_645_13
unknown

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comp(15534..15695)
DNA (162bp) protein (54aa)

This feature has no annotations

L1_008_000M1_scaffold_645_14
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15799..16155)
DNA (357bp) protein (119aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5LYZ7_9FIRM
hypothetical protein
L1_008_000M1_scaffold_645_15
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16133..17134)
DNA (1002bp) protein (334aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
CRISPR-associated endonuclease Cas1 n=1 Tax=Dorea sp. CAG:105 RepID=R5CZT3_9FIRM
CRISPR-associated protein Cas1
L1_008_000M1_scaffold_645_16
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18375..19484)
DNA (1110bp) protein (370aa)
CRISPR type III-a/mtube-associated ramp protein csm5 n=1 Tax=Clostridium sp. ASF356 RepID=N1ZTR2_9CLOT
CRISPR type III-a/mtube-associated ramp protein csm5 {ECO:0000313|EMBL:EMZ15704.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
hypothetical protein
L1_008_000M1_scaffold_645_17
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19481..20407)
DNA (927bp) protein (309aa)
CRISPR-associated RAMP protein, Csm4 family n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y1V9_9FIRM
CRISPR-associated RAMP protein, Csm4 family {ECO:0000313|EMBL:ESL02963.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
CRISPR-associated RAMP protein, Csm4 family
L1_008_000M1_scaffold_645_18
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20411..21073)
DNA (663bp) protein (221aa)
CRISPR-associated RAMP protein, Csm3 family n=1 Tax=Blautia sp. KLE 1732 RepID=U2DLZ9_9FIRM
CRISPR-associated RAMP protein, Csm3 family {ECO:0000313|EMBL:ERI97463.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
CRISPR-associated protein, Csm3 family
L1_008_000M1_scaffold_645_19
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21083..21472)
DNA (390bp) protein (130aa)
CRISPR type III-a/mtube-associated protein csm2 n=1 Tax=Clostridium sp. ASF356 RepID=N1ZFD1_9CLOT
CRISPR type III-a/mtube-associated protein csm2 {ECO:0000313|EMBL:EMZ15707.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
CRISPR-associated protein, Csm2 family
L1_008_000M1_scaffold_645_20
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21456..23828)
DNA (2373bp) protein (791aa)
CRISPR-associated protein Csm1 family n=1 Tax=Clostridium sp. CAG:122 RepID=R5RIU3_9CLOT
CRISPR-associated protein Csm1 family {ECO:0000313|EMBL:CCZ41135.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
CRISPR-associated protein, Csm1 family
L1_008_000M1_scaffold_645_21
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23818..24573)
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Thermincola potens (strain JR) RepID=D5X8I6_THEPJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG82862.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
L1_008_000M1_scaffold_645_22
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24575..25903)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DC62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73451.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L1_008_000M1_scaffold_645_23
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26099..26308)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GWS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB18492.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L1_008_000M1_scaffold_645_24
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26550..27170)
DNA (621bp) protein (207aa)
Cytidylate kinase (EC:2.7.4.14)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FVJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB17228.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L1_008_000M1_scaffold_645_25
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27604..28533)
DNA (930bp) protein (310aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
riboflavin kinase/FMN adenylyltransferase (EC:2.7.7.2 2.7.1.26)
Riboflavin biosynthesis protein RibF n=2 Tax=Eubacterium RepID=C0EV72_9FIRM
L1_008_000M1_scaffold_645_26
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28599..29621)
DNA (1023bp) protein (341aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
tRNA pseudouridine synthase B n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EV71_9FIRM
tRNA pseudouridine synthase B
L1_008_000M1_scaffold_645_27
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29602..30639)
DNA (1038bp) protein (346aa)
DHHA1 domain protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EV70_9FIRM
DHHA1 domain protein {ECO:0000313|EMBL:EEG36725.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Exopolyphosphatase-related proteins
L1_008_000M1_scaffold_645_28
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30636..31022)
DNA (387bp) protein (129aa)
Ribosome-binding factor A n=2 Tax=Eubacterium RepID=C0EV69_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
ribosome-binding factor A
L1_008_000M1_scaffold_645_29
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31037..33544)
DNA (2508bp) protein (836aa)
Translation initiation factor IF-2 n=2 Tax=Eubacterium RepID=C0EV68_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
translation initiation factor IF-2
L1_008_000M1_scaffold_645_30
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33548..33868)
DNA (321bp) protein (107aa)
Ribosomal protein L7Ae n=2 Tax=Eubacterium RepID=R6G6S2_9FIRM
Ribosomal protein L7Ae {ECO:0000313|EMBL:CDB17234.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
Displaying items 1-30 of 36 in total

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