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L1_008_000M1_scaffold_648

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_648_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..558)
DNA (558bp) protein (186aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MN00_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBL35133.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L1_008_000M1_scaffold_648_2
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(555..1829)
DNA (1275bp) protein (425aa)
Efflux ABC transporter permease protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RLW1_9FIRM
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDC48740.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L1_008_000M1_scaffold_648_3
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1826..2935)
DNA (1110bp) protein (370aa)
Efflux ABC transporter permease protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6SQ39_9FIRM
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDC48742.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L1_008_000M1_scaffold_648_4
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3456..4154)
DNA (699bp) protein (233aa)
Stage II sporulation protein R (Spore_II_R) n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MMZ8_9FIRM
Stage II sporulation protein R (spore_II_R).
Stage II sporulation protein R (Spore_II_R) {ECO:0000313|EMBL:CBL35131.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L1_008_000M1_scaffold_648_5
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4228..6174)
DNA (1947bp) protein (649aa)
NAD+ synthetase (EC:6.3.5.1)
NAD+ synthase n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6S074_9FIRM
NAD+ synthase {ECO:0000313|EMBL:CDC48746.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L1_008_000M1_scaffold_648_6
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6197..7162)
DNA (966bp) protein (322aa)
Lysophospholipase n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RIN5_9FIRM
Lysophospholipase {ECO:0000313|EMBL:CDC48748.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Lysophospholipase
L1_008_000M1_scaffold_648_7
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7484..7621)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MS59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR99627.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L1_008_000M1_scaffold_648_8
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7787..9754)
DNA (1968bp) protein (656aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBK96815.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
hypothetical protein
L1_008_000M1_scaffold_648_9

Not on your lists

10169..10372
DNA (204bp) protein (68aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1SHS0_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC53340.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L1_008_000M1_scaffold_648_10
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10620..11279
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MS62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR99630.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L1_008_000M1_scaffold_648_11
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11328..12092
DNA (765bp) protein (255aa)
wapA2; tRNA3(Ser)-specific nuclease WapA (EC:3.1.-.-)
Uncharacterized protein (Fragment) n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I745_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETA81688.1}; Flags: Fragment;; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
L1_008_000M1_scaffold_648_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12203..12712
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUN0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96799.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_648_13
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13551..13853
DNA (303bp) protein (101aa)
Uncharacterized protein n=3 Tax=root RepID=R6RCX4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC46728.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L1_008_000M1_scaffold_648_14
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13925..14710
DNA (786bp) protein (262aa)
RNA polymerase sigma factor n=3 Tax=Eubacterium siraeum RepID=D4MMY6_9FIRM
RNA polymerase, sigma subunit, RpsG/SigG
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
L1_008_000M1_scaffold_648_15
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14798..15325
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MS79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR99647.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L1_008_000M1_scaffold_648_16
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15905..16852
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUM5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96794.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_648_17
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17049..17792
DNA (744bp) protein (248aa)
3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|SAAS:SAAS00089008};; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
3-deoxy-D-manno-octulosonate cytidylyltransferase n=3 Tax=root RepID=D4JUM4_9FIRM
L1_008_000M1_scaffold_648_18
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17808..19394
DNA (1587bp) protein (529aa)
Isopropylmalate/homocitrate/citramalate synthases {ECO:0000313|EMBL:CBK96792.1}; EC=4.1.3.39 {ECO:0000313|EMBL:CBK96792.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Isopropylmalate/homocitrate/citramalate synthases (EC:4.1.3.39)
Isopropylmalate/homocitrate/citramalate synthases n=3 Tax=root RepID=D4JUM3_9FIRM
L1_008_000M1_scaffold_648_19
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19394..20419
DNA (1026bp) protein (342aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
Kinase PfkB family n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RUN8_9FIRM
Kinase PfkB family {ECO:0000313|EMBL:CDC46741.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L1_008_000M1_scaffold_648_20
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20446..22326
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MS86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR99654.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L1_008_000M1_scaffold_648_21
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22347..23126
DNA (780bp) protein (260aa)
glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33)
Glucose-1-phosphate cytidylyltransferase {ECO:0000313|EMBL:CBK96789.1}; EC=2.7.7.33 {ECO:0000313|EMBL:CBK96789.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
Glucose-1-phosphate cytidylyltransferase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUM0_9FIRM
L1_008_000M1_scaffold_648_22
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23126..25345
DNA (2220bp) protein (740aa)
Methyltransferase, FkbM family n=2 Tax=Eubacterium RepID=B0MS88_9FIRM
Methyltransferase, FkbM family {ECO:0000313|EMBL:EDR99656.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
methyltransferase, FkbM family
L1_008_000M1_scaffold_648_23
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25314..26414
DNA (1101bp) protein (367aa)
CDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:EDR99657.1}; EC=4.2.1.45 {ECO:0000313|EMBL:EDR99657.1};; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
CDP-glucose 4,6-dehydratase (EC:4.2.1.45)
CDP-glucose 4,6-dehydratase n=3 Tax=root RepID=B0MS89_9FIRM
L1_008_000M1_scaffold_648_24
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26414..27322
DNA (909bp) protein (303aa)
Nucleoside-diphosphate-sugar epimerases n=2 Tax=root RepID=D4JUL7_9FIRM
Nucleoside-diphosphate-sugar epimerases
Nucleoside-diphosphate-sugar epimerases {ECO:0000313|EMBL:CBK96786.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_648_25
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27319..27894
DNA (576bp) protein (192aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:CBK96785.1}; EC=5.1.3.13 {ECO:0000313|EMBL:CBK96785.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
dTDP-4-dehydrorhamnose 3,5-epimerase n=5 Tax=root RepID=D4JUL6_9FIRM
L1_008_000M1_scaffold_648_26
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27894..29051
DNA (1158bp) protein (386aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase {ECO:0000313|EMBL:CBK96784.1}; EC=5.4.99.9 {ECO:0000313|EMBL:CBK96784.1};; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
UDP-galactopyranose mutase n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUL5_9FIRM
L1_008_000M1_scaffold_648_27
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29067..30818
DNA (1752bp) protein (584aa)
Uncharacterized protein n=2 Tax=Eubacterium RepID=B0MS93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR99661.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
hypothetical protein
L1_008_000M1_scaffold_648_28
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30806..31762
DNA (957bp) protein (319aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum 70/3 RepID=D4JUL4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK96783.1}; TaxID=657319 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum 70/3.;"
L1_008_000M1_scaffold_648_29
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31759..32382
DNA (624bp) protein (208aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=3 Tax=Eubacterium RepID=D4JUL3_9FIRM
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:CDC46778.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
L1_008_000M1_scaffold_648_30
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32765..33193
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6RUS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC46781.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
Displaying items 1-30 of 39 in total

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