ggKbase home page

L1_008_000M1_scaffold_656

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_656_1
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

406..1986
DNA (1581bp) protein (527aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJ34_9FIRM
L1_008_000M1_scaffold_656_2
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2100..3431
DNA (1332bp) protein (444aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.17)
Bifunctional protein FolC n=1 Tax=Dorea longicatena CAG:42 RepID=R7G076_9FIRM
Bifunctional protein FolC {ECO:0000313|EMBL:CDE20311.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_656_3
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3428..3985
DNA (558bp) protein (186aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJ36_9FIRM
L1_008_000M1_scaffold_656_4
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4008..4529
DNA (522bp) protein (174aa)
HDIG domain protein n=2 Tax=Dorea RepID=A6BJ37_9FIRM
HDIG domain protein {ECO:0000313|EMBL:EDM62234.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_656_5
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4526..5341
DNA (816bp) protein (272aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJ38_9FIRM
L1_008_000M1_scaffold_656_6
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5359..6180
DNA (822bp) protein (274aa)
dihydroneopterin aldolase/2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:4.1.2.25)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G2T6_9FIRM
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase {ECO:0000313|EMBL:CDE20307.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_656_7
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6182..6889
DNA (708bp) protein (236aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BJ40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20306.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted membrane protein
L1_008_000M1_scaffold_656_8
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7323..8348
DNA (1026bp) protein (342aa)
Bile acid transporter n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJ41_9FIRM
Bile acid transporter {ECO:0000313|EMBL:EDM62238.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted Na+-dependent transporter
L1_008_000M1_scaffold_656_9
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8567..10663
DNA (2097bp) protein (699aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJ42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62239.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted exporters of the RND superfamily
L1_008_000M1_scaffold_656_10
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10709..13189
DNA (2481bp) protein (827aa)
Gram-positive signal peptide protein, YSIRK family n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJ43_9FIRM
Gram-positive signal peptide protein, YSIRK family {ECO:0000313|EMBL:EDM62240.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
X-X-X-Leu-X-X-Gly heptad repeats
L1_008_000M1_scaffold_656_11
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13530..14813
DNA (1284bp) protein (428aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=2 Tax=Dorea RepID=A6BJ44_9FIRM
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:EDM62241.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_656_12
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15158..16480
DNA (1323bp) protein (441aa)
Transporter n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJ50_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Na+-dependent transporters of the SNF family
L1_008_000M1_scaffold_656_13
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16546..17859
DNA (1314bp) protein (438aa)
Na+/H+ antiporter family protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FZH9_9FIRM
Na+/H+ antiporter family protein {ECO:0000313|EMBL:CDE20290.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
transporter, NhaC family (TC 2.A.35)
L1_008_000M1_scaffold_656_14
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17863..18333
DNA (471bp) protein (157aa)
Uncharacterized protein n=2 Tax=Dorea RepID=R7FYJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20289.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hybrid cluster protein
L1_008_000M1_scaffold_656_15
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18533..20320
DNA (1788bp) protein (596aa)
Creatinase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G2S5_9FIRM
Creatinase {ECO:0000313|EMBL:CDE20287.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
M24 family metallopeptidase
L1_008_000M1_scaffold_656_16
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20465..21706
DNA (1242bp) protein (414aa)
Metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJ54_9FIRM
Metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family {ECO:0000313|EMBL:EDM62251.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Mn2+ and Fe2+ transporters of the NRAMP family
L1_008_000M1_scaffold_656_17
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21778..22266)
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BJ55_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20284.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_656_18
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22464..22643
DNA (180bp) protein (60aa)
Uncharacterized membrane protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5GIU6_9CLOT
Uncharacterized membrane protein
Uncharacterized membrane protein {ECO:0000313|EMBL:CCY12431.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
L1_008_000M1_scaffold_656_19
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22640..23101)
DNA (462bp) protein (154aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJ58_9FIRM
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EDM62255.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L1_008_000M1_scaffold_656_20
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23315..24247
DNA (933bp) protein (311aa)
Transporter, auxin efflux carrier (AEC) family protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJ59_9FIRM
Transporter, auxin efflux carrier (AEC) family protein {ECO:0000313|EMBL:EDM62256.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Predicted permeases
L1_008_000M1_scaffold_656_21
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24261..24932
DNA (672bp) protein (224aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FWU8_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:CDE19719.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
CarD family transcriptional regulator
L1_008_000M1_scaffold_656_22
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25073..25864
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJ61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62258.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_656_23
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25909..26778
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJ62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM62259.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_656_24
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26847..27587)
DNA (741bp) protein (247aa)
RelA/SpoT domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJ63_9FIRM
RelA/SpoT domain protein {ECO:0000313|EMBL:EDM62260.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_656_25
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27815..28672
DNA (858bp) protein (286aa)
Putative membrane protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BJ64_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EDM62261.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
L1_008_000M1_scaffold_656_26
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29023..29529)
DNA (507bp) protein (169aa)
Holo-ACP synthase CitX {ECO:0000313|EMBL:EDM64164.1}; EC=2.7.7.61 {ECO:0000313|EMBL:EDM64164.1};; Flags: Fragment;; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Holo-ACP synthase CitX (Fragment) n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BCJ7_9FIRM
holo-ACP synthase CitX
L1_008_000M1_scaffold_656_27
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29810..30346
DNA (537bp) protein (179aa)
Citrate lyase acyl carrier protein {ECO:0000313|EMBL:EDM64165.1}; EC=4.1.3.6 {ECO:0000313|EMBL:EDM64165.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Citrate lyase acyl carrier protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BCJ8_9FIRM
citrate transporter, CitMHS family
L1_008_000M1_scaffold_656_28
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30405..31487)
DNA (1083bp) protein (361aa)
[citrate (Pro-3S)-lyase] ligase {ECO:0000313|EMBL:EDM64166.1}; EC=6.2.1.22 {ECO:0000313|EMBL:EDM64166.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
citrate lyase ligase (EC:6.2.1.22)
[citrate (Pro-3S)-lyase] ligase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BCJ9_9FIRM
L1_008_000M1_scaffold_656_29
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31945..33210
DNA (1266bp) protein (422aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BCK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE21510.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_656_30
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33570..34829
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G655_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE21512.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
Displaying items 1-30 of 57 in total

View Taxonomy