ggKbase home page

L1_008_000M1_scaffold_658

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_658_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..1216
DNA (1215bp) protein (405aa)
Relaxase/Mobilisation nuclease domain n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3T8_9FIRM
Relaxase/Mobilisation nuclease domain.
Relaxase/Mobilisation nuclease domain {ECO:0000313|EMBL:CBL25900.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_658_2
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1863..1988)
DNA (126bp) protein (42aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3T5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25897.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_658_3
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2329..2625)
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3T4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25896.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_658_4
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2698..2790)
DNA (93bp) protein (31aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3T3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25895.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_658_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3073..3441)
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3T2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25894.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_658_6
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3468..4757)
DNA (1290bp) protein (430aa)
Putative membrane protein n=1 Tax=Clostridium difficile CD113 RepID=T4YEM8_CLODI
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDM87108.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L1_008_000M1_scaffold_658_7
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4757..5482)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N1ZRE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ19597.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
Response regulator of the LytR/AlgR family
L1_008_000M1_scaffold_658_8
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5497..6075)
DNA (579bp) protein (193aa)
Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3T1_9FIRM
Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide
Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide {ECO:0000313|EMBL:CBL25893.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_658_9
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6047..6226)
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3T0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25892.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_658_10
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6327..7616)
DNA (1290bp) protein (430aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3S8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25890.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_658_11
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

comp(7609..8334)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6FG86_9FIRM
Response regulator of the LytR/AlgR family
Uncharacterized protein {ECO:0000313|EMBL:CDB01027.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L1_008_000M1_scaffold_658_12
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8444..10069)
DNA (1626bp) protein (542aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WXD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77590.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Transposase and inactivated derivatives
L1_008_000M1_scaffold_658_13
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10353..10715)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WXD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77591.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Transposase and inactivated derivatives
L1_008_000M1_scaffold_658_14
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10705..11091)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WXD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77592.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L1_008_000M1_scaffold_658_15
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11173..11496)
DNA (324bp) protein (108aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZTF1_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDM87106.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
Predicted transcriptional regulators
L1_008_000M1_scaffold_658_16
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11737..12717)
DNA (981bp) protein (327aa)
Transcriptional regulator, AraC family n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3S7_9FIRM
transcriptional regulator, AraC family
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CBL25889.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_658_17
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12869..13027)
DNA (159bp) protein (53aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3S6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25888.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_658_18
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13029..15056)
DNA (2028bp) protein (676aa)
Ferrous iron transporter FeoB n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3S5_9FIRM
Ferrous iron transporter FeoB {ECO:0000313|EMBL:CBL25887.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
ferrous iron transporter FeoB
L1_008_000M1_scaffold_658_19
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15075..15290)
DNA (216bp) protein (72aa)
Fe2+ transport system protein A n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3S4_9FIRM
Fe2+ transport system protein A
Fe2+ transport system protein A {ECO:0000313|EMBL:CBL25886.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_658_20
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15302..16675)
DNA (1374bp) protein (458aa)
Putative efflux protein, MATE family n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3S3_9FIRM
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBL25885.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_658_21
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16857..17774)
DNA (918bp) protein (306aa)
ABC-type transport system involved in Fe-S cluster assembly, permease component n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3S2_9FIRM
ABC-type transport system involved in Fe-S cluster assembly, permease component
ABC-type transport system involved in Fe-S cluster assembly, permease component {ECO:0000313|EMBL:CBL25884.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_658_22
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17774..18517)
DNA (744bp) protein (248aa)
ABC-type transport system involved in Fe-S cluster assembly, ATPase component n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3S1_9FIRM
ABC-type transport system involved in Fe-S cluster assembly, ATPase component
ABC-type transport system involved in Fe-S cluster assembly, ATPase component {ECO:0000313|EMBL:CBL25883.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_658_23
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18795..19058)
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R5F7N4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03847.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L1_008_000M1_scaffold_658_24
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19138..19347)
DNA (210bp) protein (70aa)
Copper chaperone n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3S0_9FIRM
Copper chaperone
Copper chaperone {ECO:0000313|EMBL:CBL25882.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_658_25
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19368..21692)
DNA (2325bp) protein (775aa)
ATPase P (EC:3.6.3.4)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FI88_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03849.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L1_008_000M1_scaffold_658_26
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22052..22270
DNA (219bp) protein (73aa)
Heavy-metal-associated domain n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3R9_9FIRM
Heavy-metal-associated domain.
Heavy-metal-associated domain {ECO:0000313|EMBL:CBL25881.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_658_27
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22295..23653
DNA (1359bp) protein (453aa)
Predicted Fe-S oxidoreductases n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3R8_9FIRM
Predicted Fe-S oxidoreductases
Predicted Fe-S oxidoreductases {ECO:0000313|EMBL:CBL25880.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_658_28
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23686..25539
DNA (1854bp) protein (618aa)
Cadmium-translocating P-type ATPase n=2 Tax=Clostridium RepID=G5FI90_9CLOT
Cadmium-translocating P-type ATPase {ECO:0000313|EMBL:CCY01024.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
cadA; Cadmium-translocating P-type ATPase
L1_008_000M1_scaffold_658_29
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25650..26012)
DNA (363bp) protein (121aa)
Transcriptional regulator, ArsR family n=1 Tax=Ruminococcus torques L2-14 RepID=D4M3R7_9FIRM
transcriptional regulator, ArsR family
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CBL25879.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L1_008_000M1_scaffold_658_30
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26093..26401
DNA (309bp) protein (103aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R5FLK3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03853.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
FNV0832; bacterial regulatory , arsR family protein
Displaying items 1-30 of 46 in total

View Taxonomy