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L1_008_000M1_scaffold_662

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_662_1
unknown

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1..219
DNA (219bp) protein (73aa)

This feature has no annotations

L1_008_000M1_scaffold_662_2
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(280..2184)
DNA (1905bp) protein (635aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
ATP-dependent zinc metalloprotease FtsH n=2 Tax=Eubacterium RepID=R6GUQ5_9FIRM
hypothetical protein
L1_008_000M1_scaffold_662_3
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2126..2716)
DNA (591bp) protein (197aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:EEG36063.1}; EC=2.4.2.8 {ECO:0000313|EMBL:EEG36063.1};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=2 Tax=Eubacterium RepID=C0EXC2_9FIRM
L1_008_000M1_scaffold_662_4
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2743..4284)
DNA (1542bp) protein (514aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G0J8_9FIRM
L1_008_000M1_scaffold_662_5
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4257..5666)
DNA (1410bp) protein (470aa)
Stage II sporulation protein E (SpoIIE). (EC:3.1.3.16)
Stage II sporulation protein E n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EXC4_9FIRM
Stage II sporulation protein E {ECO:0000313|EMBL:EEG36065.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L1_008_000M1_scaffold_662_6
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5770..6081
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EXC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG36066.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
L1_008_000M1_scaffold_662_7
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6451..6930)
DNA (480bp) protein (160aa)
Septum formation initiator n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G1B5_9FIRM
Septum formation initiator {ECO:0000313|EMBL:CDB18110.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
cell division protein FtsL
L1_008_000M1_scaffold_662_8
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6953..7402)
DNA (450bp) protein (150aa)
Putative spore cortex biosynthesis protein YabQ n=2 Tax=Eubacterium RepID=C0EXC7_9FIRM
Putative spore cortex biosynthesis protein YabQ {ECO:0000313|EMBL:CDB18111.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
spore cortex biosynthesis protein YabQ
L1_008_000M1_scaffold_662_9
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7403..7684)
DNA (282bp) protein (94aa)
Sporulation protein YabP n=2 Tax=Eubacterium RepID=C0EXC8_9FIRM
Sporulation protein YabP {ECO:0000313|EMBL:CDB18112.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
sporulation protein YabP
L1_008_000M1_scaffold_662_10
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7866..8141
DNA (276bp) protein (92aa)
DNA-binding protein HU n=3 Tax=Eubacterium RepID=C0EXC9_9FIRM
DNA-binding protein HU {ECO:0000313|EMBL:CDB18113.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Bacterial nucleoid DNA-binding protein
L1_008_000M1_scaffold_662_11
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8189..8428
DNA (240bp) protein (80aa)
S4 domain protein n=3 Tax=Eubacterium RepID=C0EXD0_9FIRM
S4 domain protein {ECO:0000313|EMBL:CDB18114.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
L1_008_000M1_scaffold_662_12
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8723..9265)
DNA (543bp) protein (181aa)
Putative stage V sporulation protein T n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EXD1_9FIRM
Putative stage V sporulation protein T {ECO:0000313|EMBL:EEG36072.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
transcriptional regulator, AbrB family
L1_008_000M1_scaffold_662_13
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9484..10602)
DNA (1119bp) protein (373aa)
Hydrolase, alpha/beta domain protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EXD2_9FIRM
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EEG36073.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Esterase/lipase
L1_008_000M1_scaffold_662_14
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10670..11440)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EXD3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG36074.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L1_008_000M1_scaffold_662_15
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11538..12824)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6FY35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB18118.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L1_008_000M1_scaffold_662_16
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13277..14284)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GC03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB19104.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L1_008_000M1_scaffold_662_17
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14873..16351
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G0V7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB19103.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L1_008_000M1_scaffold_662_18
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16662..17438)
DNA (777bp) protein (259aa)
ssuB; ABC-type uncharacterized transport system, ATPase component SsuB (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=2 Tax=Eubacterium RepID=C0EXD5_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB18957.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
L1_008_000M1_scaffold_662_19
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17438..18376)
DNA (939bp) protein (313aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GCF2_9FIRM
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CDB18956.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
ABC-type uncharacterized transport system, permease component
L1_008_000M1_scaffold_662_20
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18407..19435)
DNA (1029bp) protein (343aa)
ABC transporter substrate binding protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EXD7_9FIRM
ABC transporter substrate binding protein {ECO:0000313|EMBL:EEG36078.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
ABC-type uncharacterized transport system, periplasmic component
L1_008_000M1_scaffold_662_21
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19656..20570)
DNA (915bp) protein (305aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Malate/lactate dehydrogenases (EC:1.1.1.27)
L-lactate dehydrogenase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EXD8_9FIRM
L1_008_000M1_scaffold_662_22
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21063..21452)
DNA (390bp) protein (130aa)
Transcriptional regulator, BlaI/MecI/CopY family n=2 Tax=Eubacterium RepID=C0EXE0_9FIRM
Transcriptional regulator BlaI/MecI/CopY family {ECO:0000313|EMBL:CDB18953.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Penicillinase repressor.
L1_008_000M1_scaffold_662_23
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21650..25201)
DNA (3552bp) protein (1184aa)
Bacterial membrane protein YfhO n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EXE1_9FIRM
Bacterial membrane protein YfhO {ECO:0000313|EMBL:EEG36082.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
hypothetical protein
L1_008_000M1_scaffold_662_24
unknown

Not on your lists

25375..25692
DNA (318bp) protein (106aa)

This feature has no annotations

L1_008_000M1_scaffold_662_25
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25558..27291)
DNA (1734bp) protein (578aa)
Fibronectin type III domain protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GCE8_9FIRM
Fibronectin type III domain protein {ECO:0000313|EMBL:CDB18951.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
ErfK/YbiS/YcfS/YnhG family protein
L1_008_000M1_scaffold_662_26
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27780..28910
DNA (1131bp) protein (377aa)
dTDP-4-amino-4,6-dideoxy-D-glucose transaminase n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EXE3_9FIRM
dTDP-4-amino-4,6-dideoxy-D-glucose transaminase {ECO:0000313|EMBL:EEG36084.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
TDP-4-oxo-6-deoxy-D-glucose transaminase
L1_008_000M1_scaffold_662_27
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28977..29993
DNA (1017bp) protein (339aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEG36085.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEG36085.1};; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EXE4_9FIRM
glycosyl transferase
L1_008_000M1_scaffold_662_28
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30225..31406
DNA (1182bp) protein (394aa)
ATP-grasp domain protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G0D0_9FIRM
ATP-grasp domain protein {ECO:0000313|EMBL:CDB18948.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
phosphoribosylglycinamide synthetase, ATP-grasp (A) domain-containing protein
L1_008_000M1_scaffold_662_29
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31830..33275)
DNA (1446bp) protein (482aa)
Polysaccharide biosynthesis protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6GYW9_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDB19237.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
repeat unit transporter
L1_008_000M1_scaffold_662_30
[Eubacterium] hallii, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33286..34578)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EXE8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG36089.1}; TaxID=411469 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] hallii DSM 3353.;"
coenzyme F390 synthetase
Displaying items 1-30 of 37 in total

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