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L1_008_000M1_scaffold_679

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_679_1
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..451)
DNA (450bp) protein (150aa)
Carbon starvation protein, predicted membrane protein n=2 Tax=Alistipes RepID=I3YKW9_ALIFI
carbon starvation membrane protein
Carbon starvation protein predicted membrane protein {ECO:0000313|EMBL:CCZ75985.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L1_008_000M1_scaffold_679_2
unknown

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1007..1108
DNA (102bp) protein (34aa)

This feature has no annotations

L1_008_000M1_scaffold_679_3
unknown

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2386..2919
DNA (534bp) protein (178aa)

This feature has no annotations

L1_008_000M1_scaffold_679_4
unknown

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2924..3499
DNA (576bp) protein (192aa)

This feature has no annotations

L1_008_000M1_scaffold_679_5
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3690..4520)
DNA (831bp) protein (277aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5V392_9BACT
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:CCZ75422.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
methylase
L1_008_000M1_scaffold_679_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5012..6976)
DNA (1965bp) protein (655aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z0N0_9BACT
histidine kinase
L1_008_000M1_scaffold_679_7
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6990..7634)
DNA (645bp) protein (215aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=3 Tax=Alistipes RepID=I3YKX6_ALIFI
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:AFL77644.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_008_000M1_scaffold_679_8
Bacteroides graminisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7949..8314
DNA (366bp) protein (122aa)
chemotaxis protein CheY n=1 Tax=Alistipes sp. JC136 RepID=UPI0002892DCD
Putative two-component system response regulator {ECO:0000313|EMBL:GAK35491.1}; TaxID=1121097 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides graminisolvens DSM 19988 = JCM 15093.;"
two-component system response regulator
L1_008_000M1_scaffold_679_9
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8311..9489
DNA (1179bp) protein (393aa)
sugar transferase n=1 Tax=Alistipes sp. JC136 RepID=UPI000287F7C9
Glycosyl transferase possibly involved in lipopolysaccharide synthesis {ECO:0000313|EMBL:CDD24015.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glycosyl transferase family protein
L1_008_000M1_scaffold_679_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9499..10293
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y5Y8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24016.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
outer membrane protein
L1_008_000M1_scaffold_679_11
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10306..12489
DNA (2184bp) protein (728aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=E4M991_9BACT
exopolysaccharide biosynthesis protein
Uncharacterized protein {ECO:0000313|EMBL:EFR58515.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L1_008_000M1_scaffold_679_12
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12499..13989
DNA (1491bp) protein (497aa)
membrane protein n=1 Tax=Alistipes sp. JC136 RepID=UPI000288C89A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ75973.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L1_008_000M1_scaffold_679_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13986..14888
DNA (903bp) protein (301aa)
glycosyl transferase n=1 Tax=Alistipes sp. JC136 RepID=UPI0002888443
Putative glycosyltransferase {ECO:0000313|EMBL:CDD24020.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
glycosyltransferase
L1_008_000M1_scaffold_679_14
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14885..16060
DNA (1176bp) protein (392aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H6N3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB92880.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
glycosyl transferase family protein
L1_008_000M1_scaffold_679_15
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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16057..17196
DNA (1140bp) protein (380aa)
glycosyl transferase n=1 Tax=Alistipes sp. JC136 RepID=UPI0002899D2D
Glycosyltransferase {ECO:0000313|EMBL:CCZ75970.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
glycosyltransferase
L1_008_000M1_scaffold_679_16
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(17379..18635)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4M986_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR58432.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L1_008_000M1_scaffold_679_17
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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18886..20463
DNA (1578bp) protein (526aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H6N7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB92884.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
acetyltransferase
L1_008_000M1_scaffold_679_18
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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20494..21429
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XQZ6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24025.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Glycosyltransferases involved in cell wall biogenesis
L1_008_000M1_scaffold_679_19
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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21426..22880
DNA (1455bp) protein (485aa)
Polysaccharide biosynthesis protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y5Z9_9BACT
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDD24026.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
membrane protein
L1_008_000M1_scaffold_679_20
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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22877..24013
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YKY9_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL77657.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_008_000M1_scaffold_679_21
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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24010..25314
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Odoribacter splanchnicus CAG:14 RepID=R6F093_9PORP
glycosyl transferase family protein
Uncharacterized protein {ECO:0000313|EMBL:CDB06403.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
L1_008_000M1_scaffold_679_22
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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25377..26591
DNA (1215bp) protein (405aa)
Signal transduction histidine kinase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YKZ1_ALIFI
signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:AFL77659.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_008_000M1_scaffold_679_23
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(26987..27943)
DNA (957bp) protein (319aa)
NAD-dependent dehydratase n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F5457E
NAD-dependent dehydratase {ECO:0000313|EMBL:ETK02443.1}; TaxID=1411148 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral taxon BU063 isolate Cell 2.;"
nucleoside-diphosphate-sugar epimerase
L1_008_000M1_scaffold_679_24
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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28010..29071
DNA (1062bp) protein (354aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H6P6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB92893.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
metal-dependent hydrolase
L1_008_000M1_scaffold_679_25
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(29178..29570)
DNA (393bp) protein (131aa)
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EDS02799.1}; EC=3.2.2.- {ECO:0000313|EMBL:EDS02799.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYW3_9BACT
L1_008_000M1_scaffold_679_26
Alistipes sp. 627, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(29588..30268)
DNA (681bp) protein (227aa)
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Alistipes sp. CAG:157 RepID=R5W773_9BACT
Adenine glycosylase {ECO:0000313|EMBL:KHE42926.1}; TaxID=1501391 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. 627.;"
L1_008_000M1_scaffold_679_27
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(30406..30726)
DNA (321bp) protein (107aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R5WC36_9BACT
Protein of unknown function (DUF3467).
Uncharacterized protein {ECO:0000313|EMBL:CCZ97689.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L1_008_000M1_scaffold_679_28
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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31272..31943
DNA (672bp) protein (224aa)
Translocator protein, LysE family n=5 Tax=root RepID=B0MYK9_9BACT
Translocator protein, LysE family {ECO:0000313|EMBL:EDS02695.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Putative threonine efflux protein
L1_008_000M1_scaffold_679_29
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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31930..32640
DNA (711bp) protein (237aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Cytidylate kinase n=4 Tax=root RepID=B0MYK8_9BACT
cytidylate kinase
L1_008_000M1_scaffold_679_30
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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32685..33554
DNA (870bp) protein (290aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (EC:1.17.1.2)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=2 Tax=root RepID=R6W3L5_9BACT
Displaying items 1-30 of 38 in total

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