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L1_008_000M1_scaffold_693

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_693_1
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..117)
DNA (117bp) protein (39aa)
Predicted glycosylase n=2 Tax=Roseburia RepID=D4KYD5_9FIRM
Predicted glycosylase
Predicted glycosylase {ECO:0000313|EMBL:CDA54241.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_693_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(200..1378)
DNA (1179bp) protein (393aa)
4-O-beta-D-mannosyl-D-glucose phosphorylase {ECO:0000256|HAMAP-Rule:MF_00928}; Short=MGP {ECO:0000256|HAMAP-Rule:MF_00928};; Short=Mannosylglucose phosphorylase {ECO:0000256|HAMAP-Rule:MF_00928};; EC=2.4.1.281 {ECO:0000256|HAMAP-Rule:MF_00928};; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
4-O-beta-D-mannosyl-D-glucose phosphorylase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G6G2_9FIRM
Predicted glycosylase
L1_008_000M1_scaffold_693_3
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1422..2651)
DNA (1230bp) protein (410aa)
Cellobiose 2-epimerase {ECO:0000256|HAMAP-Rule:MF_00929}; Short=CE {ECO:0000256|HAMAP-Rule:MF_00929};; EC=5.1.3.11 {ECO:0000256|HAMAP-Rule:MF_00929};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Cellobiose 2-epimerase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6AZK6_9FIRM
N-acyl-D-glucosamine 2-epimerase
L1_008_000M1_scaffold_693_4
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2673..3548)
DNA (876bp) protein (292aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KYD2_9FIRM
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL12372.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_693_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3553..4557)
DNA (1005bp) protein (335aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) n=2 Tax=Roseburia intestinalis RepID=D4KJ96_9FIRM
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL12371.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_693_6
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4629..6098)
DNA (1470bp) protein (490aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) n=3 Tax=Roseburia RepID=D4KYD0_9FIRM
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDA54248.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_693_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7462..8487)
DNA (1026bp) protein (342aa)
Transcriptional regulators n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KYC9_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBL12369.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_693_8
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8530..10719)
DNA (2190bp) protein (730aa)
Alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6BEX1_9FIRM
Alpha-galactosidase {ECO:0000313|EMBL:CDA57611.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_693_9
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10736..12454)
DNA (1719bp) protein (573aa)
alpha-phosphoglucomutase (EC:5.4.2.2 5.4.2.8)
Phosphoglucomutase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B3H1_9FIRM
Phosphoglucomutase {ECO:0000313|EMBL:CDA57610.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_693_10
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12586..13521)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B9M8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA57609.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
hypothetical protein
L1_008_000M1_scaffold_693_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13667..14563
DNA (897bp) protein (299aa)
Transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G6H1_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEV02561.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
AraC-type DNA-binding domain-containing proteins
L1_008_000M1_scaffold_693_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14557..15675)
DNA (1119bp) protein (373aa)
CAAX amino terminal protease family n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KJ89_9FIRM
CAAX amino terminal protease family.
CAAX amino terminal protease family {ECO:0000313|EMBL:CBL10419.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_693_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15691..16980)
DNA (1290bp) protein (430aa)
Bacterial capsule synthesis protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G6H3_9FIRM
Bacterial capsule synthesis protein {ECO:0000313|EMBL:EEV02563.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Bacterial capsule synthesis protein PGA_cap.
L1_008_000M1_scaffold_693_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17125..18177)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G6H4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV02564.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
hypothetical protein
L1_008_000M1_scaffold_693_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18174..18854)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G6H5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEV02565.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Predicted membrane protein
L1_008_000M1_scaffold_693_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18860..19180)
DNA (321bp) protein (107aa)
Transcriptional regulator, PadR family n=4 Tax=Roseburia RepID=D4KJ84_9FIRM
transcriptional regulator, PadR family
Transcriptional regulator, PadR family {ECO:0000313|EMBL:CBL12359.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_693_17
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19467..21155)
DNA (1689bp) protein (563aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
adenine deaminase (EC:3.5.4.2)
Adenine deaminase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B3G6_9FIRM
L1_008_000M1_scaffold_693_18
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21183..22397)
DNA (1215bp) protein (405aa)
Predicted secreted protein n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B9L8_9FIRM
Predicted secreted protein {ECO:0000313|EMBL:CDA57599.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Predicted secreted protein
L1_008_000M1_scaffold_693_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22445..23389)
DNA (945bp) protein (315aa)
Lysophospholipase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KYB6_9FIRM
Lysophospholipase
Lysophospholipase {ECO:0000313|EMBL:CBL12356.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_693_20
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23470..24390)
DNA (921bp) protein (307aa)
Methyl-accepting chemotaxis protein n=3 Tax=Roseburia RepID=D4KJ79_9FIRM
Methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CDA57596.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_693_21
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24404..26161)
DNA (1758bp) protein (586aa)
exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=2 Tax=Roseburia RepID=C7G6I1_9FIRM
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:CDA57595.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_693_22
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26136..26891)
DNA (756bp) protein (252aa)
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
tRNA pseudouridine synthase A n=4 Tax=Roseburia RepID=D4KJ77_9FIRM
L1_008_000M1_scaffold_693_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27115..28374
DNA (1260bp) protein (420aa)
Putative peptidoglycan-binding domain-containing protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KYB2_9FIRM
Putative peptidoglycan-binding domain-containing protein
Putative peptidoglycan-binding domain-containing protein {ECO:0000313|EMBL:CBL12352.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L1_008_000M1_scaffold_693_24
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28500..30320)
DNA (1821bp) protein (607aa)
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate transaminase n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KJ75_9FIRM
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|SAAS:SAAS00039584}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_693_25
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30854..31495)
DNA (642bp) protein (214aa)
Uncharacterized protein n=3 Tax=Roseburia RepID=C7G6I6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA57587.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_693_26
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31496..32599)
DNA (1104bp) protein (368aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) n=3 Tax=Roseburia RepID=D4KYA7_9FIRM
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
Monosaccharide ABC transporter substrate-binding protein CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CDA57586.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L1_008_000M1_scaffold_693_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32624..33604)
DNA (981bp) protein (327aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KJ71_9FIRM
ABC-type sugar transport system, periplasmic component
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:CBL10401.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_693_28
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33601..35442)
DNA (1842bp) protein (614aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBL10400.1};; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
Predicted signal transduction protein with a C-terminal ATPase domain (EC:2.7.13.3)
Predicted signal transduction protein with a C-terminal ATPase domain n=2 Tax=Roseburia intestinalis RepID=D4KJ70_9FIRM
L1_008_000M1_scaffold_693_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35439..37040)
DNA (1602bp) protein (534aa)
Two component transcriptional regulator, AraC family n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4KYA3_9FIRM
Two component transcriptional regulator, AraC family {ECO:0000313|EMBL:CBL12343.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
two component transcriptional regulator, AraC family
L1_008_000M1_scaffold_693_30
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37096..37407)
DNA (312bp) protein (104aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G6J1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA57581.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
Displaying items 1-30 of 43 in total

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