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L1_008_000M1_scaffold_733

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_733_1
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..1537)
DNA (1536bp) protein (512aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Lysyl-tRNA synthetase (class II) (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YEC4_9FIRM
L1_008_000M1_scaffold_733_2
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1553..2035)
DNA (483bp) protein (161aa)
Transcription elongation factor GreA n=1 Tax=Roseburia sp. CAG:309 RepID=R6YSC6_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
greA_B1; transcription elongation factor GreA/GreB1
L1_008_000M1_scaffold_733_3
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2184..4631)
DNA (2448bp) protein (816aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YKC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34345.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_733_4
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4639..6480)
DNA (1842bp) protein (614aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z0C9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34346.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_733_5
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6495..8501)
DNA (2007bp) protein (669aa)
Arylsulfotransferase (ASST) n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZV16_9FIRM
Arylsulfotransferase (ASST) {ECO:0000313|EMBL:CDD34347.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Arylsulfotransferase (ASST).
L1_008_000M1_scaffold_733_6
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8711..9205)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YEC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD34348.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_733_7
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9509..11134)
DNA (1626bp) protein (542aa)
60 kDa chaperonin n=1 Tax=Roseburia sp. CAG:309 RepID=R6YHJ0_9FIRM
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
chaperonin GroEL
L1_008_000M1_scaffold_733_8
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11171..11458)
DNA (288bp) protein (96aa)
10 kDa chaperonin n=1 Tax=Roseburia sp. CAG:309 RepID=R6YVK8_9FIRM
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Co-chaperonin GroES (HSP10)
L1_008_000M1_scaffold_733_9
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11700..12422
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YNJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35435.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_733_10
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12408..13262)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z3G9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35436.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Protein of unknown function (DUF2899).
L1_008_000M1_scaffold_733_11
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13297..14136)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZY69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35437.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_733_12
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14159..15847)
DNA (1689bp) protein (563aa)
Glutamine--tRNA ligase {ECO:0000256|SAAS:SAAS00023088}; EC=6.1.1.18 {ECO:0000256|SAAS:SAAS00023088};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YHJ5_9FIRM
L1_008_000M1_scaffold_733_13
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15933..16688)
DNA (756bp) protein (252aa)
DNA repair protein RecO n=1 Tax=Roseburia sp. CAG:309 RepID=R6YVL6_9FIRM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
DNA replication and repair protein RecO
L1_008_000M1_scaffold_733_14
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16630..16833)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YNK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35440.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_733_15
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16939..17859)
DNA (921bp) protein (307aa)
GTPase Era n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z3H4_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
GTP-binding protein Era
L1_008_000M1_scaffold_733_16
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17880..20801)
DNA (2922bp) protein (974aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZY73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35442.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Predicted Zn-dependent peptidases, insulinase-like
L1_008_000M1_scaffold_733_17
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20817..23081)
DNA (2265bp) protein (755aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
glycogen branching enzyme (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Roseburia sp. CAG:309 RepID=R6YHK2_9FIRM
L1_008_000M1_scaffold_733_18
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23108..23776)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YVM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35444.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_733_19
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23805..25043)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YNK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35445.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_733_20
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25213..25608
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z3I0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD35446.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L1_008_000M1_scaffold_733_21
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25610..26524)
DNA (915bp) protein (305aa)
serine O-acetyltransferase (EC:2.3.1.30)
Serine O-acetyltransferase n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZY76_9FIRM
Serine O-acetyltransferase {ECO:0000313|EMBL:CDD35447.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_733_22
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26563..27165)
DNA (603bp) protein (201aa)
Probable GTP-binding protein EngB n=1 Tax=Roseburia sp. CAG:309 RepID=R6YHK7_9FIRM
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321, ECO:0000256|SAAS:SAAS00023450}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
ribosome biogenesis GTP-binding protein YsxC/EngB
L1_008_000M1_scaffold_733_23
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27179..29485)
DNA (2307bp) protein (769aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Clostridium sp. CAG:62 RepID=R7C8W6_9CLOT
L1_008_000M1_scaffold_733_24
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29568..30869)
DNA (1302bp) protein (434aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Clostridium sp. CAG:62 RepID=R7CA36_9CLOT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
clpX; ATP-dependent protease ATP-binding subunit ClpX
L1_008_000M1_scaffold_733_25
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30941..31534)
DNA (594bp) protein (198aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z3I7_9FIRM
L1_008_000M1_scaffold_733_26
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31569..32891)
DNA (1323bp) protein (441aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
Trigger factor n=1 Tax=Roseburia sp. CAG:309 RepID=R6ZY80_9FIRM
trigger factor
L1_008_000M1_scaffold_733_27
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32974..34116)
DNA (1143bp) protein (381aa)
endoglucanase Y (EC:3.2.1.156)
Reducing end xylose-releasing exo-oligoxylanase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YHL2_9FIRM
Reducing end xylose-releasing exo-oligoxylanase {ECO:0000313|EMBL:CDD35453.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L1_008_000M1_scaffold_733_28
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34142..35491)
DNA (1350bp) protein (450aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YVN7_9FIRM
L1_008_000M1_scaffold_733_29
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35714..36787)
DNA (1074bp) protein (358aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Roseburia sp. CAG:309 RepID=R6YNL9_9FIRM
L1_008_000M1_scaffold_733_30
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36917..38446)
DNA (1530bp) protein (510aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
phosphoglyceromutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Roseburia sp. CAG:309 RepID=R6Z3J4_9FIRM
Displaying items 1-30 of 39 in total

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