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L1_008_000M1_scaffold_747

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_747_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1558)
DNA (1557bp) protein (519aa)
Lysyl-tRNA synthetase (class II) (EC:6.1.1.6)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
lysyl-tRNA synthetase n=1 Tax=Lachnobacterium bovis RepID=UPI0003B57625
L1_008_000M1_scaffold_747_2
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1638..2120)
DNA (483bp) protein (161aa)
Transcription elongation factor GreA n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A9U1_9CLOT
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
greA; Transcription elongation factor GreA
L1_008_000M1_scaffold_747_3
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2447..3271
DNA (825bp) protein (275aa)
4Fe-4S binding domain protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N0B3_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CCY91011.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
NapH; polyferredoxin
L1_008_000M1_scaffold_747_4
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3449..4069
DNA (621bp) protein (207aa)
Predicted membrane protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HSN7_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CCY32755.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Predicted membrane protein
L1_008_000M1_scaffold_747_5
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4084..4857
DNA (774bp) protein (258aa)
putative Baf family transcriptional acitvator (EC:2.7.1.33)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
Type III pantothenate kinase n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UEQ5_RUMA7
L1_008_000M1_scaffold_747_6
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4941..5375)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MRR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC02388.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L1_008_000M1_scaffold_747_7
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5440..6768)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A7A6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37754.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
AAA ATPase
L1_008_000M1_scaffold_747_8
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6949..7644)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A4D2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX37753.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
putative esterase
L1_008_000M1_scaffold_747_9
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7872..9026)
DNA (1155bp) protein (385aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDT4_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EDO58346.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Uncharacterized flavoproteins
L1_008_000M1_scaffold_747_10
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9259..10368)
DNA (1110bp) protein (370aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AES1_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCX37861.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
L1_008_000M1_scaffold_747_11
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(10559..11278)
DNA (720bp) protein (240aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
ytzG; putative 16S pseudouridylate synthase (EC:4.2.1.70)
Pseudouridine synthase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y499_9FIRM
L1_008_000M1_scaffold_747_12
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(11275..11820)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y496_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD28680.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L1_008_000M1_scaffold_747_13
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11896..12408)
DNA (513bp) protein (171aa)
Phosphopantetheinyl transferase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A7K2_9CLOT
Phosphopantetheinyl transferase {ECO:0000313|EMBL:CCX37864.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
4'-phosphopantetheinyl transferase family protein
L1_008_000M1_scaffold_747_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12408..13319)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAB7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47295.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Predicted membrane protein
L1_008_000M1_scaffold_747_15
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

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comp(13423..14034)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037E7D16
Uncharacterized protein {ECO:0000313|EMBL:CDC93006.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
hypothetical protein
L1_008_000M1_scaffold_747_16
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14344..15558)
DNA (1215bp) protein (405aa)
spermidine/putrescine ABC transporter substrate-binding protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI000368F419
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EJF41294.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
spermidine/putrescine transport ATP-binding protein PotD
L1_008_000M1_scaffold_747_17
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15558..16373)
DNA (816bp) protein (272aa)
putrescine aminotransferase n=1 Tax=Clostridium sporosphaeroides RepID=UPI000371B8BD
ABC transporter, permease protein {ECO:0000313|EMBL:EJF41281.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
potC; spermidine/putrescine transport transport ATP-binding protein PotC
L1_008_000M1_scaffold_747_18
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16370..17188)
DNA (819bp) protein (273aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0N3C0_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EJF41274.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
potB; spermidine/putrescine transport ATP-binding protein PotA
L1_008_000M1_scaffold_747_19
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17178..18308)
DNA (1131bp) protein (377aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
potA; spermidine/putrescine ABC transporter ATP-binding protein (EC:3.6.3.31)
spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037DA99C
L1_008_000M1_scaffold_747_20
unknown

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comp(18781..19377)
DNA (597bp) protein (199aa)

This feature has no annotations

L1_008_000M1_scaffold_747_21
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

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comp(19544..20551)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6UNB9_9STAP
Uncharacterized protein {ECO:0000313|EMBL:CDC72297.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
putative transporter
L1_008_000M1_scaffold_747_22
unknown

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comp(20697..21293)
DNA (597bp) protein (199aa)

This feature has no annotations

L1_008_000M1_scaffold_747_23
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21311..21868)
DNA (558bp) protein (186aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LWW8_9FIRM
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS62811.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
ECF subfamily RNA polymerase sigma-70 factor
L1_008_000M1_scaffold_747_24
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22004..23593)
DNA (1590bp) protein (530aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0WP94_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EJF38236.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L1_008_000M1_scaffold_747_25
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23634..24482)
DNA (849bp) protein (283aa)
Haloacid dehalogenase hydrolase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5AHC1_9CLOT
Haloacid dehalogenase hydrolase {ECO:0000313|EMBL:CCX38756.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
HAD-superfamily hydrolase, subfamily IIB
L1_008_000M1_scaffold_747_26
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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24690..25184
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00037B7F9E
5-nitroimidazole antibiotic resistance protein
5-nitroimidazole antibiotic resistance protein {ECO:0000313|EMBL:AEF83017.1}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
L1_008_000M1_scaffold_747_27
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

25367..26647
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YM36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD29651.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
L1_008_000M1_scaffold_747_28
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

26679..27776
DNA (1098bp) protein (366aa)
MdsC protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y6Z8_9FIRM
MdsC protein {ECO:0000313|EMBL:CDD29650.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
aminoglycoside phosphotransferase
L1_008_000M1_scaffold_747_29
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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comp(27857..29146)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YAM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD28329.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
oxidoreductase domain-containing protein
L1_008_000M1_scaffold_747_30
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29318..30709)
DNA (1392bp) protein (464aa)
Citrate synthase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6I2_9CLOT
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Citrate synthase
Displaying items 1-30 of 43 in total

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