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L1_008_000M1_scaffold_754

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_754_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..533)
DNA (531bp) protein (177aa)
Lacto-N-biose phosphorylase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFZ8_BIFBI
lacto-N-biose phosphorylase
Lacto-N-biose phosphorylase 2 {ECO:0000313|EMBL:ADO52461.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_754_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(842..1222)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFZ7_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL03810.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L1_008_000M1_scaffold_754_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1174..2037)
DNA (864bp) protein (288aa)
Short chain dehydrogenase {ECO:0000313|EMBL:KFI42340.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KFI42340.1};; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
Short chain dehydrogenase n=4 Tax=Bifidobacterium bifidum RepID=E4NYY6_BIFBP
3-oxoacyl-ACP reductase
L1_008_000M1_scaffold_754_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2100..2507)
DNA (408bp) protein (136aa)
Putative mandelate racemase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WFZ5_BIFBI
menC; putative mandelate racemase
Putative mandelate racemase {ECO:0000313|EMBL:AFL03808.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L1_008_000M1_scaffold_754_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2740..2883)
DNA (144bp) protein (48aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3ELR2_BIFBS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO52457.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L1_008_000M1_scaffold_754_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3076..4092
DNA (1017bp) protein (339aa)
HTH-type transcriptional repressor n=4 Tax=Bifidobacterium RepID=I3WFZ3_BIFBI
cytR; HTH-type transcriptional repressor
HTH-type transcriptional repressor {ECO:0000313|EMBL:EKF14756.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L1_008_000M1_scaffold_754_7
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4198..4371)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum IPLA 20015 RepID=K2MBU4_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKF14757.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
hypothetical protein
L1_008_000M1_scaffold_754_8
Bifidobacterium tsurumiense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5112..6302
DNA (1191bp) protein (397aa)
Transposase for IS3509a n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZVS2_BIFLJ
IS3509a transposase {ECO:0000313|EMBL:KFJ08401.1}; TaxID=356829 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium tsurumiense.;"
transposase
L1_008_000M1_scaffold_754_9
Actinomyces sp. oral taxon 848, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6299..8005)
DNA (1707bp) protein (569aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WRG6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EEZ77324.1}; TaxID=649743 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 848 str. F0332.;"
hypothetical protein
L1_008_000M1_scaffold_754_10
Actinomyces sp. oral taxon 848, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8230..9228)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 848 str. F0332 RepID=D0WRG8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EEZ77326.1}; TaxID=649743 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 848 str. F0332.;"
L1_008_000M1_scaffold_754_11
Bifidobacterium subtile, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9334..9579)
DNA (246bp) protein (82aa)
type III restriction endonuclease n=1 Tax=Scardovia inopinata RepID=UPI0001D08EB3
Type III restriction endonuclease {ECO:0000313|EMBL:KFJ04778.1}; TaxID=77635 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium subtile.;"
type III restriction system endonuclease
L1_008_000M1_scaffold_754_12
Bifidobacterium saeculare, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9802..11235)
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NSN2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI87681.1}; TaxID=1437611 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium saeculare DSM 6531 = LMG 14934.;"
hypothetical protein
L1_008_000M1_scaffold_754_13
Bifidobacterium gallicum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11281..12645)
DNA (1365bp) protein (455aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=561180 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium gallicum DSM 20093 = LMG 11596.;"
DNA-cytosine methyltransferase (EC:2.1.1.37)
Cytosine-specific methyltransferase n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NSN1_9BIFI
L1_008_000M1_scaffold_754_14
Enterococcus asini, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12943..13452
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Enterococcus asini ATCC 700915 RepID=R2S2Z6_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOH87226.1}; TaxID=1158606 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus asini ATCC 700915.;"
hypothetical protein
L1_008_000M1_scaffold_754_15
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13471..13737)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Bifidobacterium gallicum DSM 20093 RepID=D1NSM8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI49734.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
hypothetical protein
L1_008_000M1_scaffold_754_16
Bifidobacterium callitrichos, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13826..14566)
DNA (741bp) protein (247aa)
glycosyl hydrolases family 25,lysozyme (EC:3.2.1.17)
Glycosyl hydrolases family 25,lysozyme n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NWX1_BIFBP
Glycosyl hydrolases family 25,lysozyme {ECO:0000313|EMBL:KFI50561.1}; TaxID=1437609 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium callitrichos DSM 23973.;"
L1_008_000M1_scaffold_754_17
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14514..14909)
DNA (396bp) protein (132aa)
glycosyl hydrolases family 25,lysozyme (EC:3.2.1.17)
Glycosyl hydrolases family 25,lysozyme n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NWX1_BIFBP
Glycosyl hydrolases family 25,lysozyme {ECO:0000313|EMBL:KFI49735.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
L1_008_000M1_scaffold_754_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15002..15337)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I116_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:CCK34932.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
hypothetical protein
L1_008_000M1_scaffold_754_19
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15334..16605)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I1V2_BIFLN
Tail fiber protein {ECO:0000313|EMBL:KFI95067.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium scardovii.;"
hypothetical protein
L1_008_000M1_scaffold_754_20
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16619..18835)
DNA (2217bp) protein (739aa)
Wiskott-Aldrich syndrome-like protein 1 n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I0S2_BIFLN
Phage tail fiber protein {ECO:0000313|EMBL:KFI49738.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
gp4 phage minor structural protein
L1_008_000M1_scaffold_754_21
Bifidobacterium callitrichos, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18856..19704)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZIM5_BIFBR
3-hydroxy-3-methylglutaryl CoA synthase {ECO:0000313|EMBL:KFI50565.1}; TaxID=1437609 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium callitrichos DSM 23973.;"
hypothetical protein
L1_008_000M1_scaffold_754_22
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19706..22567)
DNA (2862bp) protein (954aa)
Putative phage tale measure protein n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EPI3_BIFBS
Tail protein {ECO:0000313|EMBL:KFI49740.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
phage tale measure protein
L1_008_000M1_scaffold_754_23
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22584..23024)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q6U0_9BIFI
Gp18 {ECO:0000313|EMBL:KFI49741.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
hypothetical protein
L1_008_000M1_scaffold_754_24
Bifidobacterium callitrichos, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23000..23254)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q6U1_9BIFI
Sugar transferase {ECO:0000313|EMBL:KFI50568.1}; TaxID=1437609 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium callitrichos DSM 23973.;"
hypothetical protein
L1_008_000M1_scaffold_754_25
Bifidobacterium callitrichos, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23369..24295)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q6U2_9BIFI
Phage major tail protein {ECO:0000313|EMBL:KFI50569.1}; TaxID=1437609 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium callitrichos DSM 23973.;"
phage major tail protein
L1_008_000M1_scaffold_754_26
unknown

Not on your lists

comp(24295..24447)
DNA (153bp) protein (51aa)
hypothetical protein
L1_008_000M1_scaffold_754_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24566..24901)
DNA (336bp) protein (112aa)
Putative phage head-tail adaptor n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q6U5_9BIFI
Putative phage head-tail adaptor {ECO:0000313|EMBL:EFM41460.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
phage protein
L1_008_000M1_scaffold_754_28
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24898..25326)
DNA (429bp) protein (143aa)
Phage protein n=2 Tax=Bifidobacterium dentium RepID=D2QB79_BIFDB
Phage protein {ECO:0000313|EMBL:KFI49747.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
phage protein
L1_008_000M1_scaffold_754_29
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25338..25757)
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GTI2_BIFLS
Uncharacterized protein {ECO:0000313|EMBL:KFI49748.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium biavatii DSM 23969.;"
hypothetical protein
L1_008_000M1_scaffold_754_30
Bifidobacterium callitrichos, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25757..26671)
DNA (915bp) protein (305aa)
Phage major head n=2 Tax=Bifidobacterium breve RepID=F9Y134_BIFBU
Phage major head {ECO:0000313|EMBL:KFI50575.1}; TaxID=1437609 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium callitrichos DSM 23973.;"
Phage major head
Displaying items 1-30 of 44 in total

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