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L1_008_000M1_scaffold_780

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_780_1
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(142..861)
DNA (720bp) protein (240aa)
LytTr DNA-binding domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BH54_9FIRM
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EDM63042.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_780_2
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1261..1701
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BH56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20255.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_780_3
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1765..2052
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BH58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63046.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Coenzyme PQQ synthesis protein D (PqqD).
L1_008_000M1_scaffold_780_4
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2046..2960
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BH59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM63047.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L1_008_000M1_scaffold_780_5
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2961..4757
DNA (1797bp) protein (599aa)
ABC transporter ATP-binding protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G020_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDE20251.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
ABC-type multidrug transport system, ATPase and permease components
L1_008_000M1_scaffold_780_6
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5003..5383
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FZW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20226.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_780_7
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5456..6562
DNA (1107bp) protein (369aa)
Radical SAM domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FZ97_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:CDE20225.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted Fe-S oxidoreductases
L1_008_000M1_scaffold_780_8
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6649..7404
DNA (756bp) protein (252aa)
PHP domain protein {ECO:0000313|EMBL:EDM63051.1}; EC=3.1.3.- {ECO:0000313|EMBL:EDM63051.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Capsular polysaccharide biosynthesis protein (EC:3.1.3.48)
PHP domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BH63_9FIRM
L1_008_000M1_scaffold_780_9
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7435..8343
DNA (909bp) protein (303aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BH64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE20221.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L1_008_000M1_scaffold_780_10
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8333..9781
DNA (1449bp) protein (483aa)
Chain length determinant protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BH65_9FIRM
Chain length determinant protein {ECO:0000313|EMBL:EDM63053.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
capsular exopolysaccharide family
L1_008_000M1_scaffold_780_11
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9787..11325
DNA (1539bp) protein (513aa)
Chain length determinant protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BH66_9FIRM
Chain length determinant protein {ECO:0000313|EMBL:EDM63054.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
capsular exopolysaccharide family
L1_008_000M1_scaffold_780_12
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11340..12278
DNA (939bp) protein (313aa)
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FZ59_9FIRM
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:CDE20195.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
cell envelope-related transcriptional attenuator
L1_008_000M1_scaffold_780_13
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12328..13938
DNA (1611bp) protein (537aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BH68_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EDM63056.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
L1_008_000M1_scaffold_780_14
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14326..17475
DNA (3150bp) protein (1050aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BH69_9FIRM
L1_008_000M1_scaffold_780_15
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17509..19986
DNA (2478bp) protein (826aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=2 Tax=Dorea RepID=A6BH70_9FIRM
L1_008_000M1_scaffold_780_16
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20070..20978
DNA (909bp) protein (303aa)
SpoIID/LytB domain protein n=2 Tax=Dorea RepID=A6BH71_9FIRM
SpoIID/LytB domain protein {ECO:0000313|EMBL:CDE19539.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
SpoIID/LytB domain
L1_008_000M1_scaffold_780_17
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21023..21838
DNA (816bp) protein (272aa)
Peptidase, M23 family n=2 Tax=Dorea RepID=A6BH72_9FIRM
Peptidase M23 family {ECO:0000313|EMBL:CDE19554.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Membrane-bound metallopeptidase
L1_008_000M1_scaffold_780_18
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22021..22365
DNA (345bp) protein (115aa)
GIY-YIG catalytic domain protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0Q9_9FIRM
GIY-YIG catalytic domain protein {ECO:0000313|EMBL:EDM63061.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
putative O-methyltransferase
L1_008_000M1_scaffold_780_19
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22536..23198)
DNA (663bp) protein (221aa)
Channel protein, hemolysin III family n=2 Tax=Dorea RepID=A6BH74_9FIRM
Channel protein, hemolysin III family {ECO:0000313|EMBL:EDM63062.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
channel protein, hemolysin III family
L1_008_000M1_scaffold_780_20
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23508..24065
DNA (558bp) protein (186aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BH75_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE19599.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted membrane protein
L1_008_000M1_scaffold_780_21
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24234..24776)
DNA (543bp) protein (181aa)
Rubredoxin n=2 Tax=Dorea RepID=A6BH76_9FIRM
Rubredoxin {ECO:0000313|EMBL:EDM63064.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
rubrerythrin
L1_008_000M1_scaffold_780_22
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24937..25344)
DNA (408bp) protein (136aa)
Transcriptional regulator, Fur family n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BH77_9FIRM
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EDM63065.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Fe2+/Zn2+ uptake regulation proteins
L1_008_000M1_scaffold_780_23
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25600..26535
DNA (936bp) protein (312aa)
NlpC/P60 family protein n=2 Tax=Dorea RepID=A6BH78_9FIRM
NlpC/P60 family protein {ECO:0000313|EMBL:EDM63066.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L1_008_000M1_scaffold_780_24
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26982..27203
DNA (222bp) protein (74aa)
Hydrid cluster protein-associated redox disulfide domain protein n=2 Tax=Dorea RepID=A6BH80_9FIRM
Hydrid cluster protein-associated redox disulfide domain protein {ECO:0000313|EMBL:EDM63068.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Domain of unknown function (DUF1858).
L1_008_000M1_scaffold_780_25
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27277..28029)
DNA (753bp) protein (251aa)
Negative regulator of genetic competence (MecA) n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BFH0_9FIRM
Negative regulator of genetic competence (MecA) {ECO:0000313|EMBL:EDM63757.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Negative regulator of genetic competence, sporulation and motility
L1_008_000M1_scaffold_780_26
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28463..28675
DNA (213bp) protein (71aa)
Uncharacterized protein n=2 Tax=Dorea RepID=A6BFG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE19605.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L1_008_000M1_scaffold_780_27
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28791..30707
DNA (1917bp) protein (639aa)
SH3 domain protein n=2 Tax=Dorea RepID=R7FY51_9FIRM
SH3 domain protein {ECO:0000313|EMBL:CDE19606.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Predicted glycosyl hydrolase
L1_008_000M1_scaffold_780_28
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30783..31463
DNA (681bp) protein (227aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDM63750.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EDM63750.1};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BFG3_9FIRM
cell wall hydrolase/autolysin
L1_008_000M1_scaffold_780_29
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31475..32536
DNA (1062bp) protein (354aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Sua5/YciO/YrdC/YwlC family protein n=2 Tax=Dorea RepID=R7FYJ8_9FIRM
Sua5/YciO/YrdC/YwlC family protein
L1_008_000M1_scaffold_780_30
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32563..33192
DNA (630bp) protein (210aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Uracil phosphoribosyltransferase n=2 Tax=Dorea RepID=A6BFG1_9FIRM
uracil phosphoribosyltransferase
Displaying items 1-30 of 34 in total

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