ggKbase home page

L1_008_000M1_scaffold_789

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_789_1
unknown

Not on your lists

790..3168
DNA (2379bp) protein (793aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D93832
L1_008_000M1_scaffold_789_2
Bacteroides sp. CAG:545, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3529..4881)
DNA (1353bp) protein (451aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:545 RepID=R5SGW5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ44257.1}; TaxID=1262742 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:545.;"
L1_008_000M1_scaffold_789_3
Bacteroides sp. CAG:545, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4906..6933)
DNA (2028bp) protein (676aa)
Leucine rich repeat protein n=1 Tax=Bacteroides sp. CAG:545 RepID=R5RU39_9BACE
Leucine rich repeat protein {ECO:0000313|EMBL:CCZ44258.1}; TaxID=1262742 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:545.;"
hypothetical protein
L1_008_000M1_scaffold_789_4
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7105..8856)
DNA (1752bp) protein (584aa)
DNA-binding domain-containing protein, AraC-type n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YKM1_ALIFI
DNA-binding domain-containing protein
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:AFL77539.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_008_000M1_scaffold_789_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8961..9479
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NL07_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF14351.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
L1_008_000M1_scaffold_789_6
unknown

Not on your lists

comp(9605..9796)
DNA (192bp) protein (64aa)

This feature has no annotations

L1_008_000M1_scaffold_789_7
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9879..10901
DNA (1023bp) protein (341aa)
Tyrosine recombinase XerC n=3 Tax=Alistipes RepID=I3YME4_ALIFI
site-specific recombinase XerD
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_008_000M1_scaffold_789_8
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11127..11426
DNA (300bp) protein (100aa)
ribosome hibernation protein yhbh n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000360A3F2
ribosomal subunit interface protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:AFL78161.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L1_008_000M1_scaffold_789_9
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11566..13629)
DNA (2064bp) protein (688aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5VXT5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ95708.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L1_008_000M1_scaffold_789_10
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14255..14986
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JRJ6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE65457.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Protein of unknown function (DUF3298).
L1_008_000M1_scaffold_789_11
unknown

Not on your lists

15438..15602
DNA (165bp) protein (55aa)

This feature has no annotations

L1_008_000M1_scaffold_789_12
unknown

Not on your lists

comp(15718..16710)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002E1BB46
L1_008_000M1_scaffold_789_13
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16977..17957
DNA (981bp) protein (327aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDS03755.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDS03755.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MUP8_9BACT
glycosyl transferase family protein
L1_008_000M1_scaffold_789_14
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17960..19051
DNA (1092bp) protein (364aa)
UDP-galactopyranose mutase n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JP61_9BACT
UDP-galactopyranose mutase {ECO:0000313|EMBL:CDE65451.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
UDP-galactopyranose mutase
L1_008_000M1_scaffold_789_15
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19052..19879
DNA (828bp) protein (276aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=B0MUP6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE65449.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L1_008_000M1_scaffold_789_16
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19955..20734)
DNA (780bp) protein (260aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=B0MUP4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE65447.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L1_008_000M1_scaffold_789_17
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20734..22296)
DNA (1563bp) protein (521aa)
FAD dependent oxidoreductase n=2 Tax=Alistipes RepID=B0MUP3_9BACT
FAD dependent oxidoreductase {ECO:0000313|EMBL:CDE65445.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
FAD-dependent dehydrogenase
L1_008_000M1_scaffold_789_18
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22578..25121)
DNA (2544bp) protein (848aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IMS9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK64241.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L1_008_000M1_scaffold_789_19
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25114..25605)
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IMS8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK64240.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L1_008_000M1_scaffold_789_20
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25617..26165)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5WIN3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ95671.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Protein of unknown function (DUF3575).
L1_008_000M1_scaffold_789_21
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26462..27436)
DNA (975bp) protein (325aa)
phosphomannose isomerase (EC:5.3.1.8)
Phosphomannose isomerase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y1P7_9BACT
Phosphomannose isomerase {ECO:0000313|EMBL:CDD25184.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L1_008_000M1_scaffold_789_22
Bacteroides nordii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27575..29530
DNA (1956bp) protein (652aa)
Heavy metal translocating P-type ATPase n=1 Tax=Bacteroides nordii CL02T12C05 RepID=I8XWA5_9BACE
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EIY54312.1}; TaxID=997884 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides nordii CL02T12C05.;"
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
L1_008_000M1_scaffold_789_23
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29543..29971
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=B0MV21_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03903.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
transcriptional regulator
L1_008_000M1_scaffold_789_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30185..32131
DNA (1947bp) protein (649aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1339269 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. Korea 419.;"
hypothetical protein n=1 Tax=Butyricimonas synergistica RepID=UPI000373191C
hypothetical protein
L1_008_000M1_scaffold_789_25
GWF1_Flavobacteria_32_7_curated, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32403..33224)
DNA (822bp) protein (274aa)
Uncharacterized protein id=2545786 bin=GWF1_Flavobacteria_32_7 species=Bacteroides caccae genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF1_Flavobacteria_32_7 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF1_Flavobacteria_32_7_curated
L1_008_000M1_scaffold_789_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33314..33865)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9PVE1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY20398.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L1_008_000M1_scaffold_789_27
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34679..35617
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XWW4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD26120.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L1_008_000M1_scaffold_789_28
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36489..37448
DNA (960bp) protein (320aa)
NAD dependent epimerase/dehydratase family protein (EC:1.1.1.103)
NAD dependent epimerase/dehydratase family protein n=2 Tax=Alistipes RepID=B0MUT6_9BACT
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:CDE65480.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L1_008_000M1_scaffold_789_29
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37684..39267)
DNA (1584bp) protein (528aa)
Peptide chain release factor 3 n=2 Tax=Alistipes RepID=R6XQ31_9BACT
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
bacterial peptide chain release factor 3 (bRF-3)
L1_008_000M1_scaffold_789_30
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39279..40859)
DNA (1581bp) protein (527aa)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=2 Tax=Alistipes RepID=E4MA64_9BACT
Displaying items 1-30 of 41 in total

View Taxonomy