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L1_008_000M1_scaffold_813

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_813_1
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2036..2308)
DNA (273bp) protein (91aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0NYK1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKY24575.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L1_008_000M1_scaffold_813_2
unknown

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comp(2384..4585)
DNA (2202bp) protein (734aa)
ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
ATP-dependent DNA helicase PcrA n=2 Tax=Clostridiales RepID=D4N1D9_9FIRM
L1_008_000M1_scaffold_813_3
unknown

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4728..5339
DNA (612bp) protein (204aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NYK3_9CLOT
Domain of unknown function (DUF1836).
Uncharacterized protein {ECO:0000313|EMBL:CBL38683.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_813_4
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5348..5635)
DNA (288bp) protein (96aa)
TrpR-related protein YerC/YecD n=6 Tax=Firmicutes RepID=D4N1D7_9FIRM
TrpR-related protein YerC/YecD
Trp repressor protein {ECO:0000313|EMBL:CDA31779.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_813_5
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5710..7137)
DNA (1428bp) protein (476aa)
Amino acid carrier protein n=2 Tax=Lachnospiraceae RepID=E5VIM6_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:EKY24579.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
amino acid carrier protein
L1_008_000M1_scaffold_813_6
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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7625..8992
DNA (1368bp) protein (456aa)
Transporter n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1QA28_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Na+-dependent transporters of the SNF family
L1_008_000M1_scaffold_813_7
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9069..10340)
DNA (1272bp) protein (424aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Phosphoribosylamine--glycine ligase n=4 Tax=Clostridiales RepID=D4N1D4_9FIRM
L1_008_000M1_scaffold_813_8
unknown

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comp(10374..10997)
DNA (624bp) protein (208aa)
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930, ECO:0000313|EMBL:CBL38678.1};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase n=3 Tax=Clostridiales RepID=D4N1D3_9FIRM
L1_008_000M1_scaffold_813_9
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10991..12016)
DNA (1026bp) protein (342aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=3 Tax=Lachnospiraceae RepID=E5VIN0_9FIRM
L1_008_000M1_scaffold_813_10
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12035..12745)
DNA (711bp) protein (237aa)
N-acetylmuramoyl-L-alanine amidase n=2 Tax=Lachnospiraceae RepID=L1Q9D7_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDA31785.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
cell wall hydrolase/autolysin
L1_008_000M1_scaffold_813_11
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12738..13241)
DNA (504bp) protein (168aa)
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=5 Tax=Clostridiales RepID=D4N1D1_9FIRM
L1_008_000M1_scaffold_813_12
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13317..15320)
DNA (2004bp) protein (668aa)
Uncharacterized protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q9J0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY24586.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Leucyl aminopeptidase (aminopeptidase T)
L1_008_000M1_scaffold_813_13
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15351..15689)
DNA (339bp) protein (113aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0NYI4_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA31788.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_813_14
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15686..16171)
DNA (486bp) protein (162aa)
VanZ-like protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q9F6_9FIRM
VanZ-like protein {ECO:0000313|EMBL:EKY24588.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
VanZ family protein
L1_008_000M1_scaffold_813_15
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16174..16857)
DNA (684bp) protein (228aa)
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Orotate phosphoribosyltransferase n=5 Tax=Clostridiales RepID=D4N1C8_9FIRM
L1_008_000M1_scaffold_813_16
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16878..17297)
DNA (420bp) protein (140aa)
CBS-domain-containing membrane protein n=4 Tax=Clostridiales RepID=D4N1C7_9FIRM
CBS-domain-containing membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CDA31791.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_813_17
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17320..18222)
DNA (903bp) protein (301aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
dihydroorotate dehydrogenase (subfamily 1) family protein (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q9J5_9FIRM
L1_008_000M1_scaffold_813_18
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18222..18989)
DNA (768bp) protein (256aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=4 Tax=Clostridiales RepID=D4N1C5_9FIRM
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L1_008_000M1_scaffold_813_19
unknown

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comp(19044..19967)
DNA (924bp) protein (308aa)
orotidine 5'-phosphate decarboxylase, subfamily 2 (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000313|EMBL:CBL38669.1};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Orotidine 5'-phosphate decarboxylase n=5 Tax=Clostridiales RepID=D4N1C4_9FIRM
L1_008_000M1_scaffold_813_20
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20110..20769)
DNA (660bp) protein (220aa)
Haloacid dehalogenase-like hydrolase n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5YY48_9FIRM
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:CDA31795.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Predicted phosphatase/phosphohexomutase
L1_008_000M1_scaffold_813_21
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20792..21082)
DNA (291bp) protein (97aa)
lacG; 6-phospho-beta-galactosidase (EC:3.2.1.85)
6-phospho-beta-galactosidase n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZCE3_9FIRM
6-phospho-beta-galactosidase {ECO:0000313|EMBL:CDA31796.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L1_008_000M1_scaffold_813_22
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21058..21309)
DNA (252bp) protein (84aa)
lacG; 6-phospho-beta-galactosidase (EC:3.2.1.85)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VIP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV17326.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L1_008_000M1_scaffold_813_23
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21500..22666)
DNA (1167bp) protein (389aa)
Thiazole biosynthesis protein ThiH n=3 Tax=Lachnospiraceae RepID=E5VIP2_9FIRM
tyrosine lyase ThiH
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:EFV17327.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L1_008_000M1_scaffold_813_24
unknown

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comp(22669..23439)
DNA (771bp) protein (257aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Thiazole synthase n=5 Tax=Clostridiales RepID=D4N1C1_9FIRM
thiazole-phosphate synthase
L1_008_000M1_scaffold_813_25
unknown

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comp(23498..23692)
DNA (195bp) protein (65aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q9F2_9FIRM
thiamine biosynthesis protein ThiS
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:CBL38665.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L1_008_000M1_scaffold_813_26
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23958..25886)
DNA (1929bp) protein (643aa)
Fibronectin type III domain n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KTQ5_9FIRM
Fibronectin type III domain.
Fibronectin type III domain {ECO:0000313|EMBL:CBL10257.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L1_008_000M1_scaffold_813_27
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26252..27175)
DNA (924bp) protein (308aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5UH42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN49308.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
RNA polymerase, sigma 70 subunit, rpod subfamily
L1_008_000M1_scaffold_813_28
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27215..28063)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JZU9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS39740.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L1_008_000M1_scaffold_813_29
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28102..28542)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium BV3C26 RepID=U7UAG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJJ71708.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
L1_008_000M1_scaffold_813_30
unknown

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comp(29298..29504)
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying items 1-30 of 43 in total

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