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L1_008_000M1_scaffold_819

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_819_1
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..134
DNA (132bp) protein (44aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WSA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX73518.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
KilA-N domain-containing protein
L1_008_000M1_scaffold_819_2
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(202..444)
DNA (243bp) protein (81aa)
Growth regulator n=1 Tax=Clostridium sp. CAG:62 RepID=R7C712_9CLOT
Growth regulator {ECO:0000313|EMBL:CDD73871.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L1_008_000M1_scaffold_819_3
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(517..1290)
DNA (774bp) protein (258aa)
Transcriptional regulator MerR family n=1 Tax=Clostridium sp. CAG:510 RepID=R6BYP2_9CLOT
Transcriptional regulator MerR family {ECO:0000313|EMBL:CDA69278.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
Predicted transcriptional regulators
L1_008_000M1_scaffold_819_4
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1421..4765
DNA (3345bp) protein (1115aa)
Bacterial Ig-like domain (Group 3) n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9Z5_9CLOT
Bacterial Ig-like domain (Group 3) {ECO:0000313|EMBL:CDD74931.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
Bacterial Ig-like domain (group 3).
L1_008_000M1_scaffold_819_5
Firmicutes bacterium CAG:194, Firmicutes, Bacteria

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5105..5959
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:194 RepID=R5R622_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ28442.1}; TaxID=1263008 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:194.;"
polar amino acid transport system substrate-binding protein
L1_008_000M1_scaffold_819_6
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5971..6621
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QYA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF43209.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
polar amino acid transport system substrate-binding protein
L1_008_000M1_scaffold_819_7
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6632..7321
DNA (690bp) protein (230aa)
Amino acid ABC transporter ATP-binding protein PAAT family (TC 3.A.1.3.-) n=1 Tax=Roseburia sp. CAG:182 RepID=R7QZW8_9FIRM
Amino acid ABC transporter ATP-binding protein PAAT family (TC 3.A.1.3.-) {ECO:0000313|EMBL:CDF43208.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
putative amino acid ABC transporter ATP-binding protein
L1_008_000M1_scaffold_819_8
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7474..8766
DNA (1293bp) protein (431aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T2C1_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN96066.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_819_9
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8759..9424
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:182 RepID=R7QYP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF42808.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
hypothetical protein
L1_008_000M1_scaffold_819_10
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9456..10409
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6NX18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC10806.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
putative acetyl-hydrolase
L1_008_000M1_scaffold_819_11
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10444..11160
DNA (717bp) protein (239aa)
Polysaccharide deacetylase n=1 Tax=Roseburia sp. CAG:182 RepID=R7QVZ0_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:CDF41611.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
polysaccharide deacetylase
L1_008_000M1_scaffold_819_12
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11236..12567
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9ILP2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22728.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
recombination factor protein RarA
L1_008_000M1_scaffold_819_13
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12601..13884
DNA (1284bp) protein (428aa)
Transcriptional regulator n=1 Tax=Roseburia sp. CAG:182 RepID=R7QVC1_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDF41608.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
GntR family transcriptional regulator
L1_008_000M1_scaffold_819_14
unknown

Not on your lists

13954..14151
DNA (198bp) protein (66aa)

This feature has no annotations

L1_008_000M1_scaffold_819_15
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14145..14759
DNA (615bp) protein (205aa)
ABC-type multidrug transport system ATPase component n=1 Tax=Clostridium sp. CAG:230 RepID=R6DBG8_9CLOT
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CDA85828.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
ABC-type multidrug transport system, ATPase component
L1_008_000M1_scaffold_819_16
Clostridium sp. CAG:230, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14756..15154
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:230 RepID=R6DDG9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA85830.1}; TaxID=1262782 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:230.;"
hypothetical protein
L1_008_000M1_scaffold_819_17
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15747..16667
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KFH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35053.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
hypothetical protein
L1_008_000M1_scaffold_819_18
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17246..17680)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J7F5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT24525.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
hypothetical protein
L1_008_000M1_scaffold_819_19
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17677..18450)
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IHG2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS21213.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L1_008_000M1_scaffold_819_20
unknown

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18631..18765
DNA (135bp) protein (45aa)

This feature has no annotations

L1_008_000M1_scaffold_819_21
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18766..19404
DNA (639bp) protein (213aa)
Stage V sporulation protein AA n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T059_ROSHA
stage V sporulation protein AA
Stage V sporulation protein AA {ECO:0000313|EMBL:AEN95854.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_819_22
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19394..19825
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HQZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30524.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
hypothetical protein
L1_008_000M1_scaffold_819_23
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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19842..20312
DNA (471bp) protein (157aa)
Stage V sporulation protein AC n=2 Tax=Lachnospiraceae bacterium A2 RepID=R9K823_9FIRM
Stage V sporulation protein AC {ECO:0000313|EMBL:EOS42600.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
stage V sporulation AC, SpoVAC
L1_008_000M1_scaffold_819_24
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20891..21214
DNA (324bp) protein (108aa)
PadR family transcriptional regulator, regulatory protein PadR n=1 Tax=Eubacterium sp. 14-2 RepID=S0J9W9_9FIRM
PadR family transcriptional regulator, regulatory protein PadR {ECO:0000313|EMBL:EOT24553.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
transcriptional regulator, PadR family
L1_008_000M1_scaffold_819_25
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21211..21897
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G6H5_9FIRM
Predicted membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EEV02565.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L1_008_000M1_scaffold_819_26
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21894..22751
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IBE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY34081.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
Protein of unknown function (DUF2807).
L1_008_000M1_scaffold_819_27
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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22753..22944
DNA (192bp) protein (64aa)
Stress-responsive transcriptional regulator n=2 Tax=Methanosarcina mazei RepID=M1Q7T4_METMZ
hypothetical protein
Stress-responsive transcriptional regulator {ECO:0000313|EMBL:AKB60474.1}; TaxID=1434115 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina mazei SarPi.;"
L1_008_000M1_scaffold_819_28
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23082..23579
DNA (498bp) protein (166aa)
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWN1_ROSHA
ECF subfamily RNA polymerase sigma-24 factor
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:AEN96315.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_819_29
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23595..24521
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWN2_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN96316.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L1_008_000M1_scaffold_819_30
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24614..25180)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:45 RepID=R6P0K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC12016.1}; TaxID=1262947 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:45.;"
hypothetical protein
Displaying items 1-30 of 42 in total

View Taxonomy