ggKbase home page

L1_008_000M1_scaffold_842

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_842_1
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(151..1071)
DNA (921bp) protein (307aa)
Tyrosine recombinase XerC n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HVP9_9FIRM
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
integrase/recombinase-like protein
L1_008_000M1_scaffold_842_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1574..3775)
DNA (2202bp) protein (734aa)
ABC-type transport system n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPY8_CLOSY
ABC-type transport system {ECO:0000313|EMBL:EGA93248.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC-type transport system, involved in lipoprotein release, permease component
L1_008_000M1_scaffold_842_3
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(3921..4550)
DNA (630bp) protein (210aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HUZ4_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CCY28602.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
putative peptidoglycan hydrolase
L1_008_000M1_scaffold_842_4
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(4568..5785)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HVT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28606.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_842_5
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(5772..6659)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HGD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28608.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
ABC-type multidrug transport system, ATPase component
L1_008_000M1_scaffold_842_6
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(6650..7393)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HFT4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28610.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_842_7
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(7393..7908)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HV01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28612.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
RNA polymerase sigma factor, sigma-70 family
L1_008_000M1_scaffold_842_8
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(8081..8518)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HGF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28613.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_842_9
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(8593..9792)
DNA (1200bp) protein (400aa)
Putative membrane protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HVU2_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CCY28616.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_842_10
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(10067..10606)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HV05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28617.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_842_11
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(10738..11169)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HKH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY28619.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_842_12
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(11384..12085)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY27070.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_842_13
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(12327..12755)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HAV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26840.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_842_14
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(13057..13461)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQ89_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26686.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_842_15
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(13458..13979)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HPB1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26687.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_842_16
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14061..14417)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KUH4_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL00417.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L1_008_000M1_scaffold_842_17
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(14509..15183)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HAZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26688.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_842_18
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(15180..15698)
DNA (519bp) protein (173aa)
Sigma-70 region 2 n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HF01_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:CCY26689.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
ECF family RNA polymerase sigma-24 subunit
L1_008_000M1_scaffold_842_19
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15724..16689)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00037D5904
2-nitropropane dioxygenase
2-nitropropane dioxygenase-like enzyme {ECO:0000313|EMBL:AET68526.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
L1_008_000M1_scaffold_842_20
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

16962..17396
DNA (435bp) protein (145aa)
Acetyltransferase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HB87_9FIRM
Acetyltransferase {ECO:0000313|EMBL:CCY26965.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Acetyltransferases
L1_008_000M1_scaffold_842_21
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

17559..18464
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26923.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
LysR family transcriptional regulator
L1_008_000M1_scaffold_842_22
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

18619..20112
DNA (1494bp) protein (498aa)
aldehyde dehydrogenase (acceptor) (EC:1.2.99.3)
Aldehyde dehydrogenase (Acceptor) n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQ18_9FIRM
Aldehyde dehydrogenase (Acceptor) {ECO:0000313|EMBL:CCY26922.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_842_23
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

20245..21402
DNA (1158bp) protein (386aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQX1_9FIRM
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:CCY26921.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
iron-containing alcohol dehydrogenase
L1_008_000M1_scaffold_842_24
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(21525..22571)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HB36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26920.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L1_008_000M1_scaffold_842_25
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(22620..23180)
DNA (561bp) protein (187aa)
Putative manganese efflux pump MntP n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HFM8_9FIRM
Putative manganese efflux pump MntP {ECO:0000256|HAMAP-Rule:MF_01521}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
membrane protein
L1_008_000M1_scaffold_842_26
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(23259..24326)
DNA (1068bp) protein (356aa)
NMT1/THI5 like domain protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBK6_9FIRM
NMT1/THI5 like domain protein {ECO:0000313|EMBL:CCY26918.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
NMT1/THI5-like domain-containing protein
L1_008_000M1_scaffold_842_27
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(24401..25162)
DNA (762bp) protein (254aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQ12_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCY26917.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
binding-protein-dependent transport system inner membrane protein
L1_008_000M1_scaffold_842_28
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(25159..25947)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HQW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26916.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
ABC transporter ATP-binding protein
L1_008_000M1_scaffold_842_29
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(26113..27750)
DNA (1638bp) protein (546aa)
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase (EC:6.2.1.1)
Acyl-coenzyme A synthetases/AMP-(Fatty) acid ligases n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HB31_9FIRM
Acyl-coenzyme A synthetases/AMP-(Fatty) acid ligases {ECO:0000313|EMBL:CCY26915.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L1_008_000M1_scaffold_842_30
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(27834..28511)
DNA (678bp) protein (226aa)
Transcriptional regulatory protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HFM0_9FIRM
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Response regulator of citrate/malate metabolism
Displaying items 1-30 of 36 in total

View Taxonomy