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L1_008_000M1_scaffold_854

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_854_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..2010
DNA (2010bp) protein (670aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Isoleucine--tRNA ligase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SEZ2_9FIRM
isoleucyl-tRNA synthetase
L1_008_000M1_scaffold_854_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2103..2585
DNA (483bp) protein (161aa)
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Lipoprotein signal peptidase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6J5_9FIRM
L1_008_000M1_scaffold_854_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2589..3521
DNA (933bp) protein (311aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.12 5.4.99.-)
Pseudouridine synthase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SEZ4_9FIRM
L1_008_000M1_scaffold_854_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3518..4345
DNA (828bp) protein (276aa)
Predicted hydrolases of the HAD superfamily n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6J3_9FIRM
Predicted hydrolases of the HAD superfamily
Predicted hydrolases of the HAD superfamily {ECO:0000313|EMBL:CBL03202.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_854_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4428..4772
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6J2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL03201.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_854_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4826..7216
DNA (2391bp) protein (797aa)
Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191}; EC=2.7.4.1 {ECO:0000256|RuleBase:RU003800, ECO:0000256|SAAS:SAAS00008191};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Polyphosphate kinase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6J1_9FIRM
L1_008_000M1_scaffold_854_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7340..7870
DNA (531bp) protein (177aa)
Membrane proteins related to metalloendopeptidases n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6J0_9FIRM
Membrane proteins related to metalloendopeptidases
Membrane proteins related to metalloendopeptidases {ECO:0000313|EMBL:CBL03199.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_854_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7867..8376
DNA (510bp) protein (170aa)
Peptidase family M50 n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6I9_9FIRM
Peptidase family M50.
Peptidase family M50 {ECO:0000313|EMBL:CBL03198.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_854_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8414..10273
DNA (1860bp) protein (620aa)
Radical SAM domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF00_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:EDP19833.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Fe-S oxidoreductase
L1_008_000M1_scaffold_854_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10248..10892
DNA (645bp) protein (215aa)
Radical SAM-linked protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF01_9FIRM
Radical SAM-linked protein {ECO:0000313|EMBL:EDP19834.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L1_008_000M1_scaffold_854_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11469..12020
DNA (552bp) protein (184aa)
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042, ECO:0000313|EMBL:CBL03195.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Signal peptidase I, bacterial type n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6I6_9FIRM
L1_008_000M1_scaffold_854_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12017..12940
DNA (924bp) protein (308aa)
Ribosome biogenesis GTPase A n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6I5_9FIRM
ribosome biogenesis GTP-binding protein YlqF
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_854_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12937..13584
DNA (648bp) protein (216aa)
RNase HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Ribonuclease HII n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6I4_9FIRM
L1_008_000M1_scaffold_854_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13581..13949
DNA (369bp) protein (123aa)
UPF0102 protein FPR_31300 n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6I3_9FIRM
Predicted endonuclease distantly related to archaeal Holliday junction resolvase
UPF0102 protein FPR_31300 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_854_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14053..15513
DNA (1461bp) protein (487aa)
L-threonine synthase (EC:4.2.3.1)
L-threonine synthase {ECO:0000313|EMBL:CBL03191.1}; EC=4.2.3.1 {ECO:0000313|EMBL:CBL03191.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L-threonine synthase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6I2_9FIRM
L1_008_000M1_scaffold_854_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15550..16233
DNA (684bp) protein (228aa)
Ser/Thr phosphatase family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF08_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EDP19841.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Predicted phosphohydrolase
L1_008_000M1_scaffold_854_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16450..17766
DNA (1317bp) protein (439aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Trigger factor n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6I1_9FIRM
trigger factor
L1_008_000M1_scaffold_854_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17905..18501
DNA (597bp) protein (199aa)
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
ATP-dependent Clp protease proteolytic subunit n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6I0_9FIRM
L1_008_000M1_scaffold_854_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18538..19860
DNA (1323bp) protein (441aa)
ATP-dependent Clp protease ATP-binding subunit ClpX (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit ClpX n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6H9_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_854_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20088..21368
DNA (1281bp) protein (427aa)
Transcriptional regulator n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6H8_9FIRM
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EDP19846.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_008_000M1_scaffold_854_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21551..23884
DNA (2334bp) protein (778aa)
Protein-export membrane protein SecF n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6H7_9FIRM
protein-export membrane protein SecF
Export membrane protein SecF {ECO:0000313|EMBL:EDP19848.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_008_000M1_scaffold_854_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23901..24368
DNA (468bp) protein (156aa)
Transcriptional repressor NrdR n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6H6_9FIRM
transcriptional regulator NrdR
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_008_000M1_scaffold_854_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24427..24795)
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SF19_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL03184.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_854_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24792..25484)
DNA (693bp) protein (231aa)
Predicted membrane protein n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6H4_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL03183.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_854_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25567..27027
DNA (1461bp) protein (487aa)
Bacillus/Clostridium GerA spore germination protein n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6H3_9FIRM
Bacillus/Clostridium GerA spore germination protein.
Bacillus/Clostridium GerA spore germination protein {ECO:0000313|EMBL:CBL03182.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_854_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27024..27812
DNA (789bp) protein (263aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SF23_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL03181.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_854_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27809..28768
DNA (960bp) protein (320aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8SF24_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP19854.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L1_008_000M1_scaffold_854_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28765..30114)
DNA (1350bp) protein (450aa)
Signal transduction histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBL03179.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Signal transduction histidine kinase n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6H0_9FIRM
L1_008_000M1_scaffold_854_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30111..30797)
DNA (687bp) protein (229aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF27_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDP19856.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_000M1_scaffold_854_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30801..32582)
DNA (1782bp) protein (594aa)
Na/Pi-cotransporter n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6G8_9FIRM
Na/Pi-cotransporter
Na/Pi-cotransporter {ECO:0000313|EMBL:CBL03177.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Displaying items 1-30 of 40 in total

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