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L1_008_000M1_scaffold_858

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_858_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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316..948
DNA (633bp) protein (211aa)
SOS-response transcriptional repressors (RecA-mediated autopeptidases) n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9A9_9FIRM
SOS-response transcriptional repressors (RecA-mediated autopeptidases)
SOS-response transcriptional repressors (RecA-mediated autopeptidases) {ECO:0000313|EMBL:CBL01422.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_858_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1076..2434
DNA (1359bp) protein (453aa)
Predicted DNA-binding protein with the Helix-hairpin-helix motif n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9A8_9FIRM
Predicted DNA-binding protein with the Helix-hairpin-helix motif
Predicted DNA-binding protein with the Helix-hairpin-helix motif {ECO:0000313|EMBL:CBL01421.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_858_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2413..3210
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K9A7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01420.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_858_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3211..3615)
DNA (405bp) protein (135aa)
DNA-binding helix-turn-helix protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S6P9_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDP22962.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Helix-turn-helix.
L1_008_000M1_scaffold_858_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3883..4359
DNA (477bp) protein (159aa)
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493, ECO:0000313|EMBL:CBL01405.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Faecalibacterium prausnitzii RepID=D4K992_9FIRM
L1_008_000M1_scaffold_858_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4533..5822)
DNA (1290bp) protein (430aa)
Uncharacterized FAD-dependent dehydrogenases n=2 Tax=Faecalibacterium prausnitzii RepID=D4K991_9FIRM
Uncharacterized FAD-dependent dehydrogenases
FAD dependent oxidoreductase {ECO:0000313|EMBL:EDP22960.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_008_000M1_scaffold_858_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5789..5932)
DNA (144bp) protein (48aa)
FAD dependent oxidoreductase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZJY6_9FIRM
Uncharacterized FAD-dependent dehydrogenases
FAD dependent oxidoreductase {ECO:0000313|EMBL:EDP22960.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_008_000M1_scaffold_858_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6020..6724)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6P6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDP22959.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_008_000M1_scaffold_858_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6771..8156)
DNA (1386bp) protein (462aa)
MATE efflux family protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6P5_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDP22958.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
MATE efflux family protein
L1_008_000M1_scaffold_858_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8240..8842)
DNA (603bp) protein (201aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S6P4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01402.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_858_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8882..10261)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S6P3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01401.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_858_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10293..11132)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6P2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22955.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Protein of unknown function, DUF624.
L1_008_000M1_scaffold_858_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11351..12079
DNA (729bp) protein (243aa)
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267, ECO:0000313|EMBL:CBL01399.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K986_9FIRM
L1_008_000M1_scaffold_858_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12121..12873
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6N9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22952.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L1_008_000M1_scaffold_858_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12876..13055
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=A8S6N8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01397.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_858_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13245..14315
DNA (1071bp) protein (357aa)
Prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase {ECO:0000313|EMBL:CBL01396.1}; EC=4.2.1.51 {ECO:0000313|EMBL:CBL01396.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Prephenate dehydratase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K983_9FIRM
L1_008_000M1_scaffold_858_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14312..15355
DNA (1044bp) protein (348aa)
3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
3-dehydroquinate synthase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K982_9FIRM
L1_008_000M1_scaffold_858_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15359..16501
DNA (1143bp) protein (381aa)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Chorismate synthase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K981_9FIRM
L1_008_000M1_scaffold_858_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16503..17765
DNA (1263bp) protein (421aa)
Shikimate kinase {ECO:0000313|EMBL:EDP22946.1}; EC=2.7.1.71 {ECO:0000313|EMBL:EDP22946.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Shikimate kinase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6N3_9FIRM
Shikimate 5-dehydrogenase
L1_008_000M1_scaffold_858_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17746..18210
DNA (465bp) protein (155aa)
3-dehydroquinate dehydratase II (EC:4.2.1.10)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000313|EMBL:CBL01392.1};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
3-dehydroquinate dehydratase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K979_9FIRM
L1_008_000M1_scaffold_858_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18235..19251
DNA (1017bp) protein (339aa)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase {ECO:0000313|EMBL:CBL01391.1}; EC=2.5.1.54 {ECO:0000313|EMBL:CBL01391.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K978_9FIRM
L1_008_000M1_scaffold_858_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19344..20618
DNA (1275bp) protein (425aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K977_9FIRM
L1_008_000M1_scaffold_858_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20611..21474
DNA (864bp) protein (288aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:EDP22942.1}; EC=1.3.1.12 {ECO:0000313|EMBL:EDP22942.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6M9_9FIRM
L1_008_000M1_scaffold_858_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21498..22454
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6M8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22941.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Predicted transcriptional regulator
L1_008_000M1_scaffold_858_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22518..24569)
DNA (2052bp) protein (684aa)
ATPase, AAA family n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6M7_9FIRM
ATPase, AAA family {ECO:0000313|EMBL:EDP22940.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
ATPases of the AAA+ class
L1_008_000M1_scaffold_858_26
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24696..25154)
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K973_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL01386.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L1_008_000M1_scaffold_858_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25183..26145)
DNA (963bp) protein (321aa)
CobW/HypB/UreG, nucleotide-binding domain n=2 Tax=Faecalibacterium prausnitzii RepID=D4K972_9FIRM
CobW/HypB/UreG, nucleotide-binding domain.
Uncharacterized protein {ECO:0000313|EMBL:EDP22938.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L1_008_000M1_scaffold_858_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26182..27408)
DNA (1227bp) protein (409aa)
Putative GTPases (G3E family) n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K971_9FIRM
Putative GTPases (G3E family) {ECO:0000313|EMBL:CBL01384.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Putative GTPases (G3E family)
L1_008_000M1_scaffold_858_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27690..29489
DNA (1800bp) protein (600aa)
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:CBL01383.1}; EC=3.4.11.9 {ECO:0000313|EMBL:CBL01383.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Xaa-Pro aminopeptidase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K970_9FIRM
L1_008_000M1_scaffold_858_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29621..30340
DNA (720bp) protein (240aa)
LytTr DNA-binding domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8S6M1_9FIRM
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EDP22934.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Response regulator of the LytR/AlgR family
Displaying items 1-30 of 39 in total

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