ggKbase home page

L1_008_000M1_scaffold_878

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_878_1
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1..516
DNA (516bp) protein (172aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7NRN9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA56368.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
membrane protein
L1_008_000M1_scaffold_878_2
Bacteroides sp. CAG:98, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

539..787
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:98 RepID=R7NPQ7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDF15399.1}; TaxID=1262754 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:98.;"
hypothetical protein
L1_008_000M1_scaffold_878_3
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

864..1112
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM 13223 RepID=U6RIM3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA56370.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
hypothetical protein
L1_008_000M1_scaffold_878_4
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1404..2207
DNA (804bp) protein (268aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R7NRN3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA56372.1}; TaxID=1121098 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis B84634 = Timone 84634 = DSM 17679 = JCM; 13223.;"
metallo-beta-lactamase
L1_008_000M1_scaffold_878_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2743..3882
DNA (1140bp) protein (380aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JM08_9BACE
Phage integrase family protein {ECO:0000313|EMBL:KDS19118.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
site-specific recombinase, phage integrase family
L1_008_000M1_scaffold_878_6
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3879..4049
DNA (171bp) protein (57aa)
Toxin-antitoxin system, antitoxin component, MerR family n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K0J0_9BACE
Toxin-antitoxin system, antitoxin component, MerR family {ECO:0000313|EMBL:EFI40239.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L1_008_000M1_scaffold_878_7
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4201..4677)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JM09_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEZ27396.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
L1_008_000M1_scaffold_878_8
Prevotella sp. CAG:891, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4661..5272)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:891 RepID=R7LDN7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE86093.1}; TaxID=1262937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:891.;"
hypothetical protein
L1_008_000M1_scaffold_878_9
unknown

Not on your lists

comp(5303..5494)
DNA (192bp) protein (64aa)

This feature has no annotations

L1_008_000M1_scaffold_878_10
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5521..5784)
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K0I6_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI40235.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L1_008_000M1_scaffold_878_11
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5841..6857)
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K0I5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS19112.1}; TaxID=1339286 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3725 D9 ii.;"
hypothetical protein
L1_008_000M1_scaffold_878_12
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6860..8437)
DNA (1578bp) protein (526aa)
Replicative DNA helicase, intein-containing (EC:3.6.1.-)
Putative uncharacterized protein n=3 Tax=root RepID=H7BUJ0_9VIRU
Putative phage terminase, large subunit, PBSX family {ECO:0000313|EMBL:EFI40233.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L1_008_000M1_scaffold_878_13
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8530..8856)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JM13_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS13921.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
hypothetical protein
L1_008_000M1_scaffold_878_14
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8906..9421)
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K0I2_9BACE
Putative two-component sensor histidine kinase {ECO:0000313|EMBL:KDS13922.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
hypothetical protein
L1_008_000M1_scaffold_878_15
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9418..9846)
DNA (429bp) protein (143aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K0I1_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI40230.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L1_008_000M1_scaffold_878_16
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9851..10531)
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K0I0_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI40229.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L1_008_000M1_scaffold_878_17
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10533..10736)
DNA (204bp) protein (68aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=D1JM17_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI40228.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L1_008_000M1_scaffold_878_18
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10745..11230)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=2 Tax=root RepID=D7K0H8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS13925.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
hypothetical protein
L1_008_000M1_scaffold_878_19
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11303..11584)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K0H7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS13926.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
L1_008_000M1_scaffold_878_20
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11588..12361)
DNA (774bp) protein (258aa)
Exonuclease n=3 Tax=root RepID=D1JM18_9BACE
Exonuclease {ECO:0000313|EMBL:EEZ27405.1}; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
hypothetical protein
L1_008_000M1_scaffold_878_21
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12363..12890)
DNA (528bp) protein (176aa)
Guanylate kinase (EC:2.7.4.8)
Putative guanylate kinase (GMP kinase) n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K0H5_9BACE
Guanylate kinase family protein {ECO:0000313|EMBL:KDS13928.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
L1_008_000M1_scaffold_878_22

Not on your lists

comp(12887..15082)
DNA (2196bp) protein (732aa)
DNA polymerase III alpha subunit (EC:2.7.7.7)
Putative uncharacterized protein n=1 Tax=unidentified phage RepID=H7BUJ5_9VIRU
Putative uncharacterized protein {ECO:0000313|EMBL:AFB75490.1}; TaxID=38018 species="Viruses; unclassified phages.;" source="unidentified phage.;"
L1_008_000M1_scaffold_878_23

Not on your lists

comp(15089..16381)
DNA (1293bp) protein (431aa)
Putative uncharacterized protein n=1 Tax=unidentified phage RepID=H7BUJ6_9VIRU
Putative uncharacterized protein {ECO:0000313|EMBL:AFB75491.1}; TaxID=38018 species="Viruses; unclassified phages.;" source="unidentified phage.;"
HRDC domain-containing protein
L1_008_000M1_scaffold_878_24
Bacteroides sp. CAG:633, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16397..16594)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:633 RepID=R6G9I0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB10957.1}; TaxID=1262744 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:633.;"
L1_008_000M1_scaffold_878_25
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16597..18306)
DNA (1710bp) protein (570aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
DNA polymerase III alpha subunit (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JM22_9BACE
L1_008_000M1_scaffold_878_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18309..19346)
DNA (1038bp) protein (346aa)
Putative uncharacterized protein n=1 Tax=unidentified phage RepID=H7BUJ8_9VIRU
Putative dNA primase {ECO:0000313|EMBL:KDS13933.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
hypothetical protein
L1_008_000M1_scaffold_878_27

Not on your lists

comp(19348..20703)
DNA (1356bp) protein (452aa)
Putative uncharacterized protein n=1 Tax=unidentified phage RepID=H7BUJ9_9VIRU
Putative uncharacterized protein {ECO:0000313|EMBL:AFB75494.1}; TaxID=38018 species="Viruses; unclassified phages.;" source="unidentified phage.;"
phage associated DNA primase/helicase
L1_008_000M1_scaffold_878_28
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20687..21292)
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K0G9_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI40218.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
L1_008_000M1_scaffold_878_29
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21258..21902)
DNA (645bp) protein (215aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Bacteroides RepID=D1JM26_9BACE
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:KDS13936.1}; TaxID=1339346 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus str. 3725 D1 iv.;"
hypothetical protein
L1_008_000M1_scaffold_878_30
Bacteroides sp. CAG:633, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21863..22135)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:633 RepID=R6FPP6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB10951.1}; TaxID=1262744 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:633.;"
Displaying items 1-30 of 42 in total

View Taxonomy