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L1_008_000M1_scaffold_925

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L1_008_000M1_scaffold_925_1
unknown

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1..99
DNA (99bp) protein (33aa)

This feature has no annotations

L1_008_000M1_scaffold_925_2
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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191..985
DNA (795bp) protein (265aa)
Cof-like hydrolase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QMZ1_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CCZ23536.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
HAD hydrolase
L1_008_000M1_scaffold_925_3
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1091..2908
DNA (1818bp) protein (606aa)
GTP-binding protein TypA/BipA n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q433_9FIRM
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:CCZ23535.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
typA; GTP-binding protein TypA
L1_008_000M1_scaffold_925_4
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2917..3750)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6ENZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98899.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
MerR family transcriptional regulator
L1_008_000M1_scaffold_925_5
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3857..5038
DNA (1182bp) protein (394aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JLS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38061.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
alcohol dehydrogenase
L1_008_000M1_scaffold_925_6
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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5031..5687
DNA (657bp) protein (219aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=R5QCN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19783.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
cyclase
L1_008_000M1_scaffold_925_7
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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5687..6346
DNA (660bp) protein (220aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R5QJI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV19782.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
hypothetical protein
L1_008_000M1_scaffold_925_8
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

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6330..7742
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EG47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98895.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
glycoside/pentoside/hexuronide transporter
L1_008_000M1_scaffold_925_9
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7822..8634
DNA (813bp) protein (271aa)
TIGR00159 family protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QB90_9FIRM
TIGR00159 family protein {ECO:0000313|EMBL:CCZ23534.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
conserved hypothetical protein TIGR00159
L1_008_000M1_scaffold_925_10
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8627..10027
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4X7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23533.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
YbbR-like domain-containing protein ybbR
L1_008_000M1_scaffold_925_11
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10040..11392
DNA (1353bp) protein (451aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRE7_9FIRM
L1_008_000M1_scaffold_925_12
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11487..12140
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QMY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23531.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L1_008_000M1_scaffold_925_13
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12140..13447
DNA (1308bp) protein (436aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q428_9FIRM
OmpR family two component system sensor histidine kinase CssS
L1_008_000M1_scaffold_925_14
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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13571..14647
DNA (1077bp) protein (359aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QB85_9FIRM
murG; UDP-N-acetylglucosamine/LPS N-acetylglucosaminetransferase
L1_008_000M1_scaffold_925_15
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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14650..15564
DNA (915bp) protein (305aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4X3_9FIRM
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
L1_008_000M1_scaffold_925_16
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15566..16318
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23527.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
cell division protein DivIB
L1_008_000M1_scaffold_925_17
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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16416..17678
DNA (1263bp) protein (421aa)
Cell division protein FtsA n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QMY4_9FIRM
Cell division protein FtsA {ECO:0000313|EMBL:CCZ23526.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
cell division protein FtsA
L1_008_000M1_scaffold_925_18
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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17698..18780
DNA (1083bp) protein (361aa)
Cell division protein FtsZ n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q423_9FIRM
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
ftsZ; cell division protein FtsZ
L1_008_000M1_scaffold_925_19
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18830..19603
DNA (774bp) protein (258aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QB82_9FIRM
L1_008_000M1_scaffold_925_20
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19707..20444
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4X0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23523.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
L1_008_000M1_scaffold_925_21
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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20444..21139
DNA (696bp) protein (232aa)
RNA polymerase sigma factor n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRD9_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
RNA polymerase sigma 70
L1_008_000M1_scaffold_925_22
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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21174..21953
DNA (780bp) protein (260aa)
RNA polymerase sigma factor n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QMY3_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
RNA polymerase, sigma subunit, RpsG/SigG
L1_008_000M1_scaffold_925_23
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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21978..22220
DNA (243bp) protein (81aa)
YlmC/YmxH family sporulation protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q418_9FIRM
YlmC/YmxH family sporulation protein {ECO:0000313|EMBL:CCZ23520.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
YlmC/YmxH family sporulation protein
L1_008_000M1_scaffold_925_24
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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22299..22739
DNA (441bp) protein (147aa)
Cell division protein SepF n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QB79_9FIRM
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_925_25
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22769..23527
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4W5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23518.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
RNA-binding protein S4
L1_008_000M1_scaffold_925_26
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23537..23980
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QRD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ23517.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
divIVA; cell division protein DivIVA
L1_008_000M1_scaffold_925_27
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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24190..26928
DNA (2739bp) protein (913aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QMY0_9FIRM
L1_008_000M1_scaffold_925_28
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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27041..27922
DNA (882bp) protein (294aa)
Putative membrane protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q413_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CCZ23515.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
hypothetical protein
L1_008_000M1_scaffold_925_29
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27919..29190
DNA (1272bp) protein (424aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5QB75_9FIRM
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:CCZ23514.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
D-alanyl-D-alanine carboxypeptidase
L1_008_000M1_scaffold_925_30
Coprobacillus sp. CAG:235, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29300..30085
DNA (786bp) protein (262aa)
Cof protein n=1 Tax=Coprobacillus sp. CAG:235 RepID=R5Q4W1_9FIRM
Cof protein {ECO:0000313|EMBL:CCZ23513.1}; TaxID=1262854 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:235.;"
HAD-superfamily hydrolase, subfamily IIB
Displaying items 1-30 of 35 in total

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